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相关概念视频

Combinatorial Gene Control02:33

Combinatorial Gene Control

8.4K
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
8.4K
Cis-regulatory Sequences02:02

Cis-regulatory Sequences

10.1K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
10.1K
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

1.0K
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
1.0K
Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

6.1K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
6.1K
Multi-input and Multi-variable systems01:22

Multi-input and Multi-variable systems

149
Cruise control systems in cars are designed as multi-input systems to maintain a driver's desired speed while compensating for external disturbances such as changes in terrain. The block diagram for a cruise control system typically includes two main inputs: the desired speed set by the driver and any external disturbances, such as the incline of the road. By adjusting the engine throttle, the system maintains the vehicle's speed as close to the desired value as possible.
In the absence...
149
Constitutive and Regulated Gene Expression01:27

Constitutive and Regulated Gene Expression

124
Gene expression in prokaryotes is governed by constitutive and regulated systems, allowing cells to balance the production of essential proteins with adaptive responses to environmental changes.Constitutive Gene ExpressionConstitutive, or housekeeping, genes are continuously expressed as they encode proteins vital for fundamental cellular processes. These include enzymes for glycolysis, ribosomal components for protein synthesis, and proteins involved in DNA replication. Their constant...
124

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相关实验视频

Updated: Sep 11, 2025

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
10:44

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline

Published on: December 7, 2021

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BFMDDT:一个基于决策树的基因监管网络,从多种类型的数据集推断.

Mingcan Wang, Zhiqiong Wang, Luxuan Qu

    IEEE transactions on computational biology and bioinformatics
    |August 14, 2025
    PubMed
    概括

    这项研究介绍了BFMDDT,这是一种用于基因调节网络 (GRN) 重建的新方法. BFMDDT有效地集成多种类型的数据集,以提高GRN推断的准确性和效率.

    科学领域:

    • 计算生物学 计算生物学
    • 生物信息学是一种生物信息学.
    • 系统生物学 系统生物学

    背景情况:

    • 基因调节网络 (GRN) 的重建是一个复杂的挑战.
    • 现有的方法通常依赖于单一的数据类型,限制了全面的分析.
    • 整合不同的数据集可以提高GRN推理的准确性.

    研究的目的:

    • 提出一种新的方法,BFMDDT,用于使用多类型数据集的GRN重建.
    • 改进现有的基于决策树 (DT) 的GRN推断方法.
    • 通过数据集成,提高GRN重建的准确性和效率.

    主要方法:

    • 采用一种新的数据整合策略,从多种类型的数据集中创建不同的训练集.
    • 集合决策树 (DT) 模型被用来确定基因调节关系 (输入和输出).
    • 从DT模型中提取特征的重要性,并结合起来生成GRN建设的全球排名.

    主要成果:

    • BFMDDT证明了从多种类型的基因表达数据集中有效地提取信息.
    • 实验结果验证了GRN重建数据整合的有效性.
    • 拟议的方法在GRN推断中显示出高精度,效率和可扩展性.

    更多相关视频

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    A Protocol for Using Gene Set Enrichment Analysis to Identify the Appropriate Animal Model for Translational Research
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    A Protocol for Using Gene Set Enrichment Analysis to Identify the Appropriate Animal Model for Translational Research

    Published on: August 16, 2017

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    相关实验视频

    Last Updated: Sep 11, 2025

    Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
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    Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline

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    Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers
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    Author Spotlight: Impact of Intergenic Interactions on Disease-Identifying Dark Biomarkers

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    A Protocol for Using Gene Set Enrichment Analysis to Identify the Appropriate Animal Model for Translational Research
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    A Protocol for Using Gene Set Enrichment Analysis to Identify the Appropriate Animal Model for Translational Research

    Published on: August 16, 2017

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    结论:

    • 通过利用多种类型的数据集成,BFMDDT为GRN重建提供了一个强大的方法.
    • 该方法的设计允许扩展性和与其他计算技术的结合.
    • BFMDDT显著推进了GRN推断领域,并提高了性能.