在hPSC分化到内皮,中皮和外皮系的过程中,可转移元素表达和亚细胞动态
Isaac A Babarinde1,2, Xiuling Fu1,3, Gang Ma1,4
1Department of Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.
Nature communications
|August 18, 2025
概括
可转移元素 (TE) 在人类胚胎发育中发挥着动态作用. 这些基因组序列在早期发育过程中显示出不同的表达模式和染色质相互作用,影响生物过程.
科学领域:
- 基因组学就是基因组学.
- 发展生物学 发展生物学
- 分子生物学分子生物学
背景情况:
- 可转移元素 (TE) 是在哺乳动物基因组中多个副本中发现的重复性DNA序列.
- 在历史上被低估,TEs因其在关键生物过程中的作用而越来越被认可,包括胚胎发育.
研究的目的:
- 研究人类早期发育过程中可转移元素的动态表达模式.
- 构建血统特定的转录组组件,并精确地绘制TE序列在分化人类多能干细胞 (hPSCs).
主要方法:
- 从hPSCs生成长读序列数据.
- 在实验室中将hPSC分化为内皮,中皮和外皮谱系.
- 构建特定于血统的转录组组件,用于准确的TE放置和表达分析.
主要成果:
- 特定的可转移元素超级家族在分化过程中表现出不同的表达模式.
- 观察到"TE切换",其中相同的TE家族通过不同细胞类型的不同转录表达.
- 含有TE的转录显示出多样化的稳定性和亚细胞局部化,在生殖层细胞中增加了染色质关联.
结论:
- 可转移的元素通过动态表达和色素相互作用,为人类胚胎发育做出贡献.
- 在基因组序列之外,TEs表现出复杂的调节作用.
- 这项研究强调了TE在人类早期发展中的功能意义.
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