转录组测序揭示了两个相关的Pagurus物种的进化历史和基因表达进化
Zakea Sultana1, Isaac Adeyemi Babarinde2, Masafumi Nozawa3,4
1Fisheries Division, Japan International Research Center for Agricultural Sciences, Tsukuba, Ibaraki, Japan.
两种密切相关的隐居类,Pagurus lanuginosus和Pagurus maculosus,在624万年前分离. 分子分析揭示了腿部独特的基因表达,特别是颜色和细胞外矩阵的发展,推动了它们独特的形态差异.
科学领域:
- 海洋生物学
- 进化遗传学
- 分子生物学
背景情况:
- 帕格鲁斯·拉努吉诺斯和帕格鲁斯·马库洛斯是密切相关的隐士物种.
- 最近的研究突出了它们的独特特征.
研究的目的:
- 在P. lanuginosus和P. maculosus的分歧之后调查分子和基因表达的演变.
- 了解这两种隐士之间的形态差异的遗传基础.
主要方法:
- 在脑胸部和脚动物组织上进行了转录组序列和de novo转录组合.
- 估计同义词和非同义词的分歧.
- 进行了植物遗传分析以确定分离时间.
- 在物种和组织之间比较基因表达模式.
主要成果:
- 遗传学分析表明差异大约在624万年前.
- 同义和非同义差异率分别为0. 0246和0. 0066.
- 大约5%的蛋白质编码转录显示了积极选择的特征.
- 头部基因表达保留,而腿部表达不同:P. maculosus显示出细胞外基因和与素相关的基因的调节,而P. lanuginosus显示出色素基因的调节.
结论:
- 这项研究阐明了P. lanuginosus和P. maculosus的分子进化史.
- 腿部组织中的基因表达差异导致了这些隐士物种之间的形态差异.
- 发现突出了特定基因组的作用,包括用于色素和细胞外基因组的基因组,在驱动物种分歧方面.
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