全面计算建模和GIPR同质化的相互作用机制
Zichong Huang1, Limin Du2, Xulei Fu2
1College of Chemistry and Green Catalysis Center, Zhengzhou University, Zhengzhou, 450001, China.
Journal of molecular graphics & modelling
|August 28, 2025
概括
这项研究使用计算方法模拟了依赖葡萄糖的胰岛素多受体跨膜域 (GIPR-TMD) 的同位素. 这些模型为GIPR二元化提供了洞察力,有助于开发新的糖尿病疗法.
科学领域:
- 生物化学和分子生物学
- 药理学
- 计算生物学
背景情况:
- G蛋白结合受体 (GPCR) 是关键的跨膜蛋白调节细胞信号通路.
- 葡萄糖依赖性胰岛素多受体 (GIPR) 在葡萄糖平衡和胰岛素分泌中起着关键作用.
- GPCR二元化,特别是在跨膜域 (TMD) 中,影响受体功能,但由于其短暂性质,难以实验研究.
研究的目的:
- 通过计算预测和建模GIPR跨膜域的同质结构 (GIPR-TMD).
- 提供GIPR二元化机制的结构见解.
- 为针对GIPR功能的新疗法奠定基础.
主要方法:
- 使用混合计算方法结合多种蛋白质对接软件.
- 采用动态结构优化技术来完善预测模型.
- 专注于生成GIPR-TMD的潜在同位体模型.
主要成果:
- 生成了GIPR-TMD的潜在同位体模型.
- 开发的模型作为进一步结构和功能分析的基础.
- 这项研究证明了计算方法在探索短暂的GPCR二元结构中的实用性.
结论:
- 计算建模为研究GIPR-TMD同质化提供了可行的策略.
- 经过验证的GIPR-TMD二元模型可以阐明激活机制.
- 这项研究通过了解GIPR的作用来支持代谢障碍的新疗法的开发.
相关概念视频
Activation and Inactivation of G Proteins
7.6K
Heterotrimeric G proteins are guanine nucleotide-binding proteins. As the name suggests, heterotrimeric G proteins are composed of three subunits: alpha, beta, and gamma. They remain GDP-bound or GTP-bound inside the cells and switch between inactive/active states. The Gα subunit possesses the nucleotide-binding pocket that binds guanine nucleotides and switches between GDP or GTP-bound states. In contrast, the Gꞵ and Gγ subunits are always bound together with high...
7.6K
Assembly of Signaling Complexes
5.9K
Multiprotein signaling complexes are formed in a dynamic process involving protein-protein interactions at the cytoplasmic domain of transmembrane receptors or enzymatic and non-enzymatic proteins associated with the receptor. These complexes ensure the activation and propagation of intracellular signals that regulate cell functions.
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
5.9K
Transducer Mechanism: G Protein–Coupled Receptors
2.4K
G Protein–Coupled Receptors (GPCRs) are membrane-bound receptors that transiently associate with heterotrimeric G proteins and induce an appropriate response to various stimuli. GPCRs regulate critical physiological pathways and are excellent drug targets for treating diseases such as diabetes, cancer, obesity, depression, or Alzheimer's. Nearly 35% of approved drugs implement their therapeutic effects by selectively interacting with specific GPCRs.
GPCRs are also called heptahelical,...
GPCRs are also called heptahelical,...
2.4K
G Protein-coupled Receptors
13.3K
G Protein-Coupled Receptors or GPCRs are membrane-bound receptors that transiently associate with heterotrimeric G proteins and induce an appropriate response to sensory stimuli such as light, odors, hormones, cytokines, or neurotransmitters.
GPCRs are also called heptahelical, 7TM, or serpentine receptors, and consist of seven (H1-H7) transmembrane alpha-helices that span the bilayer to form a cylindrical core. The transmembrane helices are connected by three extracellular loops and three...
GPCRs are also called heptahelical, 7TM, or serpentine receptors, and consist of seven (H1-H7) transmembrane alpha-helices that span the bilayer to form a cylindrical core. The transmembrane helices are connected by three extracellular loops and three...
13.3K
Protein-protein Interfaces
13.2K
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
13.2K
G-protein Coupled Receptors
121.2K
G-protein coupled receptors are ligand binding receptors that indirectly affect changes in the cell. The actual receptor is a single polypeptide that transverses the cell membrane seven times creating intracellular and extracellular loops. The extracellular loops create a ligand specific pocket which binds to neurotransmitters or hormones. The intracellular loops holds onto the G-protein.
121.2K


