高质量的Cephonodes sanshaensis全基因组数据
Chao Tang1, Ye-Song Ren2, Zhi Gong1
1Environment and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, China.
Data in brief
|September 2, 2025
概括
创建了Cephonodes sanshaensis的高质量基因组组. 这种基因组资源支持未来关于进化和基因组架构的研究.
科学领域:
- 基因组学
- 昆虫学
- 生物信息学
背景情况:
- 在生态上,斯芬奇科 (Sphingidae) 是一个重要的家族,其中包括"仙" (Cephonodes sanshaensis).
- 高质量的基因组组合对于理解昆虫的进化和多样性至关重要.
研究的目的:
- 为了生成Cephonodes sanshaensis的高质量全基因组.
- 为虫研究提供基因组资源.
主要方法:
- 使用PacBio HiFi测序技术进行基因组测序.
- 使用hifiasm组装器和Purge_dups工具进行基因组构建和改进.
- 基因组注释集成的转录组数据和多种预测方法.
主要成果:
- 基因组大小为384.76Mb,N50的密度为14.22Mb.
- 一个全面的预测蛋白质编码基因组被生成.
- 基因组组合和原始读数是公开的.
结论:
- 这项研究为Cephonodes sanshaensis提供了第一个高质量的基因组组.
- 该基因组资源有助于在Sphingidae和Lepidoptera中进行基因组比较.
- 它可以进一步探索基因组架构和进化过程.
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