高活性的染色体区域优先与分隔染色体间空间的两个环状网络相关
bioRxiv : the preprint server for biology
|September 5, 2025
概括
核斑点 (NS) 影响基因表达. 新的研究揭示了不同的围模式,也调节了基因活动,表明了超出NS接触的新基因表达.
科学领域:
- 细胞生物学
- 基因组学
- 表观遗传学
背景情况:
- 核斑点 (NS) 是参与RNA处理的核体.
- 已知基因表达受到核内染色体的空间组织的影响.
- 之前的研究表明,一组活跃的基因与NS有关.
研究的目的:
- 研究核斑点与基因表达之间的空间关系.
- 识别可能影响基因活动的新型核区或"".
- 探索围区域的动态及其与基因调节的关联.
主要方法:
- 高分辨率显微镜可视化核斑点和染色体区域.
- 蛋白质度映射以识别周围的模式.
- 在NS枯竭条件下进行基因表达分析 (RNA测序).
- 基因转录与围模式的差异关联分析.
主要成果:
- 鉴定出两个由NS延伸的动态围蛋白模式.
- 活跃的染色体区域,没有直接接触到NS,与这些围模式相关.
- 与围模式相关的基因显示出对上调的偏差,与NS相关的基因形成对比.
结论:
- 染色体间空间被划分为核斑之外的基因表达"".
- 围模式代表了基因表达和mRNA动态的新型调节环境.
- 这些发现扩大了我们对核架构在基因组调节中的作用的理解.
相关概念视频
Histone Variants at the Centromere
4.5K
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
4.5K
Polytene Chromosomes
10.2K
Polytene chromosomes are giant interphase chromosomes with several DNA strands placed side by side. They were discovered in the year 1881 by Balbiani in salivary glands, intestine, muscles, malpighian tubules, and hypoderm of larvae Chironomus plumosus. Hence, these are also called "Salivary gland chromosomes." These are found in insects of the order Diptera and Collembola; in certain organs of mammals; and synergids, antipodes of flowering plants. Polytene chromosomes are also...
10.2K
Heterochromatin
14.3K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
14.3K
Euchromatin
7.3K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
7.3K
Lampbrush Chromosomes
8.0K
In 1882, Flemming observed lampbrush chromosomes (LBC) in salamander eggs. Later in 1892, Rückert observed LBCs in shark egg cells and coined the term "lampbrush chromosomes" because they looked like brushes used to clean kerosene lamps.
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
8.0K
Chromatin Position Affects Gene Expression
23.7K
Chromatin is the massive complex of DNA and proteins packaged inside the nucleus. The complexity of chromatin folding and how it is packaged inside the nucleus greatly influences access to genetic information. Generally, the nucleus' periphery is considered transcriptionally repressive, while the cell's interior is considered a transcriptionally active area.
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
23.7K


