在急性感染期间,基因漂移对宿主流感病毒群体有很强的作用,但不单独起作用
bioRxiv : the preprint server for biology
|September 5, 2025
概括
基因漂移显著影响宿主体内的A型流感病毒 (IAV) 演变. 虽然人类的IAV进化与经典模型保持一致,但猪的IAV动态表明存在额外的进化力量.
科学领域:
- 病毒学
- 进化生物学
- 人口遗传学
背景情况:
- A型流感病毒 (IAV) 的演变在人口水平上得到了充分研究,由抗原漂移驱动.
- 宿主内 IAV 演变的特征较少,但对于理解新菌株的出现至关重要.
- 在急性感染期间,随机过程与宿主病毒进化的形成有关.
研究的目的:
- 量化宿主体内的IAV种群中的遗传漂移.
- 评估静态过程在宿主体内的IAV进化中的作用.
- 为了比较人类和猪的宿主内IAV进化动态.
主要方法:
- 应用"刺贝塔"种群遗传模型
- 纵向内部单核酸变异 (iSNV) 频率数据的分析.
- 观察到的iSNV动态与Wright-Fisher模型模拟的比较.
主要成果:
- 在人类 (N_E = 41) 和猪 (N_E = 10) 中估计的小有效种群大小.
- 观察到的人类IAV进化动态与Wright-Fisher模型在低有效种群大小时一致.
- 猪IAV的进化动态显示了统计证据,拒绝了赖特-费舍尔模型的唯一适用性.
结论:
- 遗传漂移在宿主体内IAV遗传多样性的形成中发挥着重要作用.
- 在宿主体内的人类IAV进化似乎在很大程度上受遗传漂移和赖特-费舍尔模型的支配.
- 猪IAV进化可能涉及遗传漂移以外的其他因素,如空间效应或选择.
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