转录组分析揭示了肺癌和特定亚型的替代拼接生物标志物,这些生物标志物由RNA结合蛋白调节
Yilei Liu1, Chenxi Zhang1, Youqi Zheng1
1Department of Computational Biology, School of Life Sciences, Fudan University, Shanghai 200438, China.
Molecular therapy. Nucleic acids
|September 8, 2025
概括
研究人员在肺癌中确定了关键的替代拼接 (AS) 生物标志物,揭示了QKI和SR蛋白质作为关键调节剂. 这些发现为肺癌亚型提供了潜在的治疗点.
科学领域:
- 在瘤学瘤学.
- 分子生物学分子生物学
- 基因组学就是基因组学.
背景情况:
- 肺癌是全球癌症死亡的主要原因之一.
- 肺癌的分子机制,特别是亚型中的替代拼接 (AS),需要进一步阐明.
研究的目的:
- 综合分析肺癌的转录组景观,重点关注AS.
- 确定肺癌和亚型特定的AS生物标志物及其调节机制.
主要方法:
- 对178名肺癌患者进行了RNA测序.
- 进行了转录组和调控网络分析,重点关注RNA结合蛋白.
主要成果:
- 强大的肺癌和亚型特定的AS生物标志物被确定,在组织和细胞系中得到验证.
- 确定了QKI和SR蛋白质是调节AS事件的关键拼接因素.
- QKI调节了PLEKHA1第15个子的拼接,而SRSF1调节了MKNK2第14个子的拼接.
结论:
- 阐明了肺癌中关键的AS事件和调节机制.
- 已识别的AS生物标志物和调节剂代表了肺癌的潜在治疗标.
相关概念视频
RNA Splicing
60.4K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
60.4K
Alternative RNA Splicing
24.7K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
24.7K
Alternative RNA Splicing
4.8K
4.8K
lncRNA - Long Non-coding RNAs
9.8K
In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
9.8K
lncRNA - Long Non-coding RNAs
3.5K
3.5K
Chromatin Structure Regulates pre-mRNA Processing
8.1K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
8.1K


