MSI.EAGLE:一个开源的GUI,用于简化质谱成像分析.
Daniel J Boehmler1,2,3,4, Ashley Woolfork3,4, Ai Wen Tan3,4
1Department of Cancer Biology, University of Pennsylvania, Philadelphia, PA.
bioRxiv : the preprint server for biology
|September 18, 2025
概括
质谱成像 (MSI) 分析通过R-Shiny应用程序MSI.EAGLE进行简化. 这个工具使非专家能够有效地分析复杂的空间分子数据.
科学领域:
- 空间生物学 空间生物学
- 分子成像学分子成像学
- 生物信息学是一种生物信息学.
背景情况:
- 质谱成像 (MSI) 能够进行空间分子分布分析.
- 复杂的MSI数据往往会带来重大的分析挑战.
- 对于非专业人士来说,可访问性仍然是MSI数据分析的障碍.
研究的目的:
- 推出MSI.EAGLE,一个开源的R-Shiny应用程序用于MSI数据分析.
- 为更广泛的科学受众提高先进的MSI分析工具的可访问性.
- 为了促进更有效地分析空间分子分布.
主要方法:
- 开发MSI.EAGLE,一个R-Shiny应用程序.
- 整合来自Cardinal MSI包中的工具.
- 实施增强的表型,细分,统计分析和可视化功能.
主要成果:
- MSI.EAGLE为复杂的MSI数据提供了一个用户友好的界面.
- 该应用程序集成了先进的分析和可视化工具.
- 它赋予研究人员,包括非专家,在空间生物学.
结论:
- MSI.EAGLE使MSI数据分析变得民主化.
- 该应用程序解决了空间生物学研究中的关键需求.
- 它促进了更广泛的科学界对MSI技术的参与.
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