尽管在半水生虫中存在无声的tRNA变异,但COX1突变推动了结构性创新
Tianyou Zhao1, Yunfei Wu2, Zhuo Chen1
1State Key Laboratory of Agricultural and Forestry Biosecurity, MOA Key Lab of Pest Monitoring and Green Management, Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, 100193, China.
International journal of biological macromolecules
|October 4, 2025
概括
这项研究详细介绍了半水生虫 (Gerroidea) 中的线粒体基因组结构,揭示了基因重组和高度保护. 独特的特征可能来自随机遗传变异,而不是适应性进化.
科学领域:
- 进化生物学 进化生物学
- 基因组学就是基因组学.
- 分子生物学分子生物学
背景情况:
- 半水生虫 (Gerroidea) 是一种生活在各种环境中的水生昆虫类.
- 对于Gerroidea.的线粒体基因存在有限的结构研究.
- 现有的数据缺口阻碍了对它们线粒体进化的理解.
研究的目的:
- 扩大关于Gerroidea中的线粒体基因组的现有数据.
- 分析线粒体基因排列和结构多样性.
- 研究对线粒体蛋白质编码基因 (PCG) 的选择性压力.
主要方法:
- 测序了16个新的线粒体基因组.
- 对线粒体全长转录组的分析.
- 线粒体基因排列和结构的比较分析.
- 选择性压力分析,使用基于子的模型.
主要成果:
- 测序了16个新的线粒体基因组和一个转录组,填补了Microveliinae,Veliinae和Eotrechinae的数据缺口.
- 发现两种转移RNA (tRNA) 已经在Microveliinae中重新定位.
- 在PCG中,大约64.11%的编码体处于负选择状态,这表明它们的保护程度很高.
- 在Ptilomerinae中较长的COX1基因似乎没有被转录,尽管结构分析表明了潜在的额外链结构.
结论:
- 线粒体基因重组和结构多样性与tRNA变化相关.
- 这种血统中独特的线粒体特征很可能是由于纯化选择下的随机遗传变异造成的.
- 证据不支持这些观察到的线粒体特征的选择驱动的遗传适应.
相关概念视频
Gene Evolution - Fast or Slow?
8.0K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
8.0K
Cis-regulatory Sequences
11.6K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
11.6K
Mutations
94.3K
Overview
94.3K
Mutations
42.7K
Mutations are changes in the sequence of DNA. These changes can occur spontaneously or they can be induced by exposure to environmental factors. Mutations can be characterized in a number of different ways: whether and how they alter the amino acid sequence of the protein, whether they occur over a small or large area of DNA, and whether they occur in somatic cells or germline cells.
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
42.7K
Mutations in Microorganisms
507
Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
507
Leaky Scanning
5.6K
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.6K


