在Cas9内部的UGI转移减少了Cas9依赖的离基编辑器中的目标效应
1Institute of Pediatrics, Children's Hospital, Institutes for Translational Brain Research, State Key Laboratory of Medical Neurobiology, MOE Frontiers Center for Brain Science, Fudan University, Shanghai, 200032, China.
Scientific reports
|October 10, 2025
概括
细胞因子基编辑器 (CBEs) 可以实现精确的DNA编辑. 将 uracil DNA glycosylase 抑制剂 (UGI) 转移到 Cas9 尼克酶 (nCas9) 中,可以显著减少非目标突变,同时保持目标效率.
科学领域:
- 分子生物学分子生物学
- 基因组编辑 基因组编辑
- 生物技术是生物技术.
背景情况:
- 细胞因子基编辑器 (CBEs) 使用Cas9尼克酶 (nCas9) 和细胞因子除氨酶进行C-T转换.
- 乌拉DNA糖酶抑制剂 (UGI) 与nCas9的融合通过抑制乌拉切除修复来增强编辑.
- 传统的CBE表现出强烈的目标活动,但遭受了Cas9依赖的DNA目标外影响.
研究的目的:
- 开发具有减少目标之外活动的高可靠性CBE.
- 调查UGI空间重组对CBE业绩的影响.
- 为改进基因组编辑平台建立一个替代工程策略.
主要方法:
- 通过在nCas9架构中内部融合UGI来设计CBEs.
- 评估目标编辑效率. 评估目标编辑效率.
- 量化了Cas9依赖的DNA目标外活动.
主要成果:
- 战略性的UGI迁移保持了与传统CBEs相比的目标编辑效率.
- 在工程CBEs中,Cas9依赖的DNA目标外活动大大减少.
- 内部核聚变战略为传统nCas9核聚变提供了替代方案.
结论:
- 在nCas9中对UGI进行空间重组是开发高保真CBE的可行策略.
- 这种方法提供了一个改进的基因组编辑应用程序的平台,通过尽量减少不必要的DNA修改.
- 这些发现为CBE优化提供了一个新的工程范式.
相关概念视频
CRISPR/Cas9 Genome Editing
1.7K
The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
1.7K
CRISPR
57.5K
Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
57.5K
Homologous Recombination
62.6K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
62.6K
Conservative Site-specific Recombination and Phase Variation
6.6K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
6.6K
CRISPR and crRNAs
18.7K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
18.7K
Mismatch Repair
6.3K
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
6.3K


