开发整体静电和静电度 (ESEC) 描述器,用于建模染色学度分离
Jordy Peeters1, Pieter De Gauquier1, Fardine Ameli1
1Faculty of Medicine and Pharmacy, Department of Analytical Chemistry, Applied Chemometrics and Molecular Modelling, Vrije Universiteit Brussel (VUB), Brussels, Belgium.
PloS one
|October 17, 2025
概括
开发了新的整体体和静电性性 (ESEC) 描述器,以预测性分离. 这些描述器准确地模拟了各种药物的色谱分离,实现了高预测准确度.
科学领域:
- 计算化学计算化学
- 化学信息学 化学信息学
- 奇拉性研究 奇拉性研究
背景情况:
- 性分子存在作为反体,经常表现出不同的生物活动.
- 在制药开发中,预测反体分离至关重要.
- 预测性分离的现有方法是有限的,特别是对于不同的化学结构.
研究的目的:
- 开发新的性分子描述器,用于预测酶体分离.
- 引入一种方法来量化构造组合不对称性.
- 为了验证这些描述符使用药物化合物的定量结构-Enantioselectivity关系 (QSER).
主要方法:
- 使用标量三倍积和形状扭曲量化定义的奇拉描述符.
- 通过分子动力学对构造组合的平均描述值.
- 总体内的量化描述符值分布不对称.
- 开发了使用整体静电和静电性 (ESEC) 描述符的线性QSER模型.
主要成果:
- 最好的QSER模型使用了7个ESEC描述符.
- 对于选择性因子,实现了0.0814的低离开一个失误的交叉验证错误.
- 成功预测了23个分子中的21个分子的化序列.
- 准确预测了42个分子中27个分子的选择性因子 (αRS).
结论:
- ESEC描述符提供了一个强大的方法来建模合色谱分离.
- 这项研究为各种药物集提供了第一个可接受的线性QSER模型.
- 开发的描述符显示出在染色学中预测酶选择性的巨大潜力.
相关概念视频
Prochirality
4.8K
The concept of prochirality leads to the nomenclature of the individual faces of a molecule and plays a crucial role in the enantioselective reaction. It is a concept where two or more achiral molecules react to produce chiral products. A typical process is the reaction of an achiral ketone to generate a chiral alcohol. Here, the achiral reactant reacts with an achiral reducing agent, sodium borohydride, to generate an equimolar mixture of the chiral enantiomers of the product. For example, an...
4.8K
¹H NMR Chemical Shift Equivalence: Enantiotopic and Diastereotopic Protons
3.2K
Replacing each alpha-hydrogen in chloroethane by bromine (or a different functional group) yields a pair of enantiomers. Such protons are called prochiral or enantiotopic and are related by a mirror plane. Enantiotopic protons are chemically equivalent in an achiral environment. Because most proton NMR spectra are recorded using achiral solvents, enantiotopic hydrogens yield a single signal.
In chiral compounds such as 2-butanol, replacing the methylene hydrogens at C3 produces a pair of...
In chiral compounds such as 2-butanol, replacing the methylene hydrogens at C3 produces a pair of...
3.2K
Racemic Mixtures and the Resolution of Enantiomers
21.2K
A racemic mixture, or racemate, is an equimolar mixture of enantiomers of a molecule that can be separated using their unique interaction with chiral molecules or media. Racemic mixtures are denoted by the (±)- prefix. This ‘optical rotation descriptor’ applies to the whole solution of a racemic mixture rather than a specific stereoisomer. Enantiomers typically have the same physical and chemical properties. Hence, they are not easily separable. However, enantiomers can exhibit...
21.2K
Chirality in Nature
16.6K
Chirality is the most intriguing yet essential facet of nature, governing life’s biochemical processes and precision. It can be observed from a snail shell pattern in a macroscopic world to an amino acid, the minutest building block of life. Most of the snails around the world have right-coiled shells because of the intrinsic chirality in their genes. All the amino acids present in the human body exist in an enantiomerically pure state, except for glycine - the sole achiral amino acid.
16.6K
Chirality at Nitrogen, Phosphorus, and Sulfur
6.8K
Chirality is most prevalent in carbon-based tetrahedral compounds, but this important facet of molecular symmetry extends to sp3-hybridized nitrogen, phosphorus and sulfur centers, including trivalent molecules with lone pairs. Here, the lone pair behaves as a functional group in addition to the other three substituents to form an analogous tetrahedral center that can be chiral.
A consequence of chirality is the need for enantiomeric resolution. While this is theoretically possible for all...
A consequence of chirality is the need for enantiomeric resolution. While this is theoretically possible for all...
6.8K
Properties of Enantiomers and Optical Activity
21.1K
It is essential to understand the difference between chiral and achiral interactions and the implications thereof in optical activity and their applications. Just as our feet, which are chiral, interact uniquely with chiral objects, such as a pair of shoes, but identically with achiral socks, enantiomers of a molecule exhibit different properties only when they interact with other chiral media. An example of a significant implication from this facet is the phenomenon known as optical activity,...
21.1K


