通过MALDI-TOF优化丝状真菌的识别MS:关键因素的比较分析
Özlem Dogan1,2, Busra Betul Ozmen-Capin3, John White3,4
1Division of Clinical Microbiology F2, Department of Laboratory Medicine, Karolinska University Hospital, Huddinge, 141 86 Stockholm, SE, Sweden.
概括
使用MSI-2.0数据库和板上提取的Sirius One系统实现了94.1%的准确性来识别有线状真菌. 这种方法为临床真菌学实验室提供了快速有效的工作流.
科学领域:
- 临床微生物学 临床微生物学
- 菌类学 菌类学是指菌类学.
- 质谱测量质量谱测量
背景情况:
- 在临床实验室中,识别状真菌是个挑战.
- 飞行质谱的矩阵辅助激光脱吸/电离时间 (MALDI-TOF MS) 正在发展为模具识别.
研究的目的:
- 评估两个Bruker MALDI-TOF MS系统 (Sirius One,Microflex 3.1) 的使用情况.
- 评估不同的提取协议和用于真菌识别的数据库配置.
主要方法:
- 分析了68种丝状真菌分离物.
- 使用的 in-tube 和 on-plate 蛋白质提取方法.
- 在Sirius One和Microflex 3.1系统上获得了光谱.
- 使用制造商数据库和MSI-2.0数据库.
主要成果:
- 西里斯一号与MSI-2数据库实现了92.6%的准确性,超过了Microflex (70.6%).
- 制造商数据库的结果较低 (51.5%的Sirius One,41.2%的Microflex).
- 使用Sirius One和MSI-2数据库进行板上提取,准确率达到了94.1%.
结论:
- 西里乌斯一号,MSI-2.0数据库和板上提取为真菌识别提供了有效的工作流程.
- 这种方法推用于临床真菌学诊断.
- 需要进一步优化制造商数据库.
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