PCNA是加载器ATPase复合体的核酸交换因子
Joshua Pajak1, Jacob T Landeck1, Xingchen Liu1
1Department of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, MA 01605.
概括
细菌菌的粘合剂加载器,复制因子C (RFC),紧紧地结合ADP. 滑动,增殖细胞核抗原 (PCNA),作为一个核酸交换因子,促进ADP释放RFC回收.
科学领域:
- 分子生物学分子生物学
- 生物化学 生物化学
- 结构生物学 结构生物学
背景情况:
- 所有生命都依赖于将环形滑动的蛋白质复合体装载到DNA上.
- 滑动加载器,如复制因子C (RFC),是保存的AAA+ ATPases,对于这个过程至关重要.
- 在多次加载事件后,紧固件加载器回收利用的机制仍然不太清楚.
研究的目的:
- 为了研究Saccharomyces cerevisiae加载器的回收机制,RFC.
- 为了阐明滑动的作用,增殖细胞核抗原 (PCNA),在RFC功能中.
- 了解RFC如何释放ADP以准备随后的紧固件加载周期.
主要方法:
- 在没有PCNA或核酸的情况下,X射线晶体学以确定RFC的结构.
- 分子动力学模拟以分析RFC-PCNA相互作用和核酸交换.
- 生物化学测试以验证结构发现的功能影响.
主要成果:
- RFC结构显示了多个ATPase活性位点的紧密ADP结合,表明核酸交换受调节.
- PCNA结合诱导了快速的ADP交换,这表明PCNA作为核酸交换因子 (NEF).
- PCNA可能会将RFC子单元分开,促进ADP释放并使RFC回收成为可能.
结论:
- PCNA作为RFC的NEF功能,促进有效的ADP释放和加载器回收利用.
- 这种基质介导的NEF机制可以在PCNA加载之前通过RFC防止过早的DNA结合.
- 这些发现为DNA复制机制的调节和效率提供了关键的见解.
相关概念视频
The Replisome
38.0K
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with...
38.0K
Allosteric Proteins-ATCase
6.4K
Binding sites linkages can regulate a protein's function. For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
6.4K
The ADP/ATP Carrier Protein
4.1K
ADP/ATP carrier or AAC protein is the most abundant carrier protein in the inner mitochondrial membrane. It transports large quantities of ADP and ATP, equivalent to the average human body weight, every day. Among other transporters, ACC protein is one of the best-studied members of the mitochondrial carrier protein family. The ADP/ATP carrier protein comprises two transmembrane helices connected to a loop and a single alpha-helix on the matrix side. It switches between two conformational...
4.1K
Coat Assembly and GTPases
4.2K
Vesicles incorporate different coat protein subunits in different cell locations, which changes the properties of the coat, such as the shape and geometry of the transport vesicles. Thus, vesicle coat proteins also play a significant role in cargo selection.
Coat assembly depends on the local availability of phosphatidylinositol phosphates or PIPs and GTP-binding proteins. Adaptor proteins, which link the coat proteins to the membrane, bind to these PIPs and play a crucial role in controlling...
Coat assembly depends on the local availability of phosphatidylinositol phosphates or PIPs and GTP-binding proteins. Adaptor proteins, which link the coat proteins to the membrane, bind to these PIPs and play a crucial role in controlling...
4.2K
DNA Damage can Stall the Cell Cycle
9.9K
In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
9.9K
DNA Damage Can Stall the Cell Cycle
3.0K
In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
3.0K


