纵向肠道微生物群跟踪揭示了横向基因转移的动态
Haoran Peng1, Sergio Andreu-Sanchez1,2, Angel J Ruiz-Moreno1,2
1University of Groningen, University Medical Center Groningen, Department of Genetics, Groningen, The Netherlands.
Nature communications
|November 22, 2025
概括
水平基因转移 (HGT) 驱动细菌进化并稳定人类肠道微生物群. 细菌之间的基因交换促进了社区的稳定,并反映了宿主的生活方式,为个性化健康提供了洞察力.
科学领域:
- 微生物学 微生物学
- 遗传学 是一个遗传学.
- 人类微生物组研究研究
背景情况:
- 水平基因转移 (HGT) 是细菌的一个关键的进化机制.
- 人类肠道微生物组随着时间的推移而形成HGT的作用尚不清楚.
研究的目的:
- 研究HGT对人类肠道微生物群的纵向影响.
- 在元基因组数据中开发检测最近HGT事件的方法.
主要方法:
- 从338个人的676个便样本进行了纵向元基因组分析 (生命线-DEEP研究).
- 利用一种新的工作流来检测从元基因组组装基因组中最近发生的HGT事件.
- 在大约4年的时间里,分析了116种肠道细菌物种的HGT事件.
主要成果:
- 在过去的1万年内确定了5,644个高保证度HGT事件.
- 具有HGT关系的物种在4年内表现出更稳定的共同丰富性,表明HGT有助于社区稳定.
- 主体的生活方式,如使用质子抑制剂,与特定的基因转移事件 (例如,多药物转运器) 相相关.
结论:
- HGT是人类肠道生态系统中不可或缺的稳定力量.
- HGT促进了肠道微生物组内的适应性功能的传播.
- 个性化和稳定的移动基因池表明HGT跟踪宿主生活方式和环境暴露.
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