主体转录对肠道微生物群因城市化而产生的变异的反应
Sabrina Arif1, Shreya Nirmalan2, Adnan Alazizi2
1Section of Genetic Medicine, Department of Medicine, University of Chicago, Chicago, IL, USA.
bioRxiv : the preprint server for biology
|November 24, 2025
概括
城市化改变了肠道微生物组,影响了宿主基因表达. 这些微生物组的变化会影响免疫反应和上皮细胞功能,特定的细菌与饮食等生活方式因素有关.
科学领域:
- 微生物学 微生物学
- 人体生理学 人体生理学
- 基因组学就是基因组学.
背景情况:
- 城市和农村的肠道微生物体表现出组成上的差异.
- 这些差异与免疫失调和胃肠道疾病有关.
- 这些微生物群变异对宿主生理学的直接影响尚不清楚.
研究的目的:
- 研究城市与农村肠道微生物对宿主转录反应的直接影响.
- 阐明微生物组组成影响宿主上皮细胞的机制.
主要方法:
- 人类结肠上皮细胞与来自不同全球社区 (卢旺达,加纳,尼日利亚,马来西亚,美国) 的活体,便衍生的肠道微生物组共同培养.
- 用RNA测序 (RNA-seq) 来量化宿主转录的变化.
主要成果:
- 城市微生物组调节天生的免疫路径,包括TNF信号传递和细菌抗原识别.
- 高多样性的微生物组诱导了更强的宿主转录反应.
- 低多样性的微生物组引发了上皮质重组和改变的糖分解.
- 特定的种群,如*Bifidobacterium adolescentis*和*Bacteroides dorei*,被确定为这些影响的驱动因素,与饮食相关.
结论:
- 城市化相关的肠道微生物组变化直接影响宿主上皮细胞基因表达.
- 微生物群的多样性在宿主的转录反应中起作用.
- 特定的微生物种群和宿主生理学与生活方式因素,特别是饮食有关.
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