在季节性环境中基因表达的演变
Shuichi N Kudo1, Yuka Ikezaki2, Junko Kusumi3
1Graduate School of Systems Life Sciences, Kyushu University, Fukuoka, Japan.
eLife
|November 25, 2025
概括
在四种亚洲树物种中,季节性基因表达显示了保存的冬季模式,在芽中更常见的是节奏表达. 这表明一个共享的分子日历影响着不断变化的环境中的进化动态.
科学领域:
- 植物生物学 植物生物学
- 进化生物学是进化的生物学.
- 基因组学就是基因组学.
背景情况:
- 生物活动受到季节性的强烈影响.
- 现象学,即生物事件的时间,是由基因表达调节的.
- 季节性基因表达的进化动态尚未得到充分理解.
研究的目的:
- 研究季节性基因表达的进化动态.
- 为了比较四种占主导地位的亚洲常青树叶科植物物种的全基因组表达动态 (分子表现学).
主要方法:
- 组装了四种Fagaceae物种的高质量参考基因组.
- 在两个季节周期中,在叶子和芽组织中进行了11749个单复制的正本基因的季节性转录基因分析.
- 分析了保存和节奏表达的基因表达模式,包括周期性和季节性峰值.
主要成果:
- 在冬季 (温度低于~10°C) 期间,在物种中观察到高度保存的基因表达.
- 节律性基因表达在芽中 (51.9%) 比叶子 (40.6%) 更为普遍,大多数都表现出年度周期性.
- 节律基因的季节性峰值在冬季同步,但在生长季节出现分歧,反映了特定物种的现象事件.
结论:
- 亚洲的四种树叶植物种类在冬季共享一个保存的分子日历.
- 这种保存的冬季基因表达限制了季节性表达模式的演变.
- 生长季节表达的差异反映了物种对季节性环境的特定适应.
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