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相关概念视频

Chromatin Position Affects Gene Expression02:35

Chromatin Position Affects Gene Expression

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Chromatin is the massive complex of DNA and proteins packaged inside the nucleus. The complexity of chromatin folding and how it is packaged inside the nucleus greatly influences  access to genetic information. Generally, the nucleus' periphery is considered transcriptionally repressive, while the cell's interior is considered a transcriptionally active area. 
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
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From DNA to Protein03:06

From DNA to Protein

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The flow of genetic information in cells from DNA to mRNA to protein is described by the central dogma, which states that genes specify the sequence of mRNAs, which in turn specify the sequence of amino acids making up all proteins. The decoding of one molecule to another is performed by specific proteins and RNAs. Because the information stored in DNA is so central to cellular function, it makes intuitive sense that the cell would make mRNA copies of this information for protein synthesis...
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Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

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The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
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Chromatin Structure Regulates pre-mRNA Processing02:41

Chromatin Structure Regulates pre-mRNA Processing

8.1K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
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What is Gene Expression?01:36

What is Gene Expression?

10.8K
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised  of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then...
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What is Gene Expression?01:42

What is Gene Expression?

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Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
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相关实验视频

Updated: Jan 9, 2026

In Vivo Modeling of the Morbid Human Genome using Danio rerio
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In Vivo Modeling of the Morbid Human Genome using Danio rerio

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核效应在确定依赖于编码子使用的人类基因表达方面发挥着重要作用.

Renu Garg1, Pancheng Xie1, Jiabin Duan1

  • 1Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX, USA.

Nature communications
|December 3, 2025
PubMed
概括

基因表达受代码子使用偏差的影响. 核机制,包括CCR4-NOT复合体和RNA外体,通过转录和mRNA稳定效应调节基因表达,影响人类细胞.

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Analysis of mRNA Nuclear Export Kinetics in Mammalian Cells by Microinjection
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An Allele-specific Gene Expression Assay to Test the Functional Basis of Genetic Associations
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相关实验视频

Last Updated: Jan 9, 2026

In Vivo Modeling of the Morbid Human Genome using Danio rerio
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In Vivo Modeling of the Morbid Human Genome using Danio rerio

Published on: August 24, 2013

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Analysis of mRNA Nuclear Export Kinetics in Mammalian Cells by Microinjection
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Analysis of mRNA Nuclear Export Kinetics in Mammalian Cells by Microinjection

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An Allele-specific Gene Expression Assay to Test the Functional Basis of Genetic Associations
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科学领域:

  • 分子生物学分子生物学
  • 基因规则 基因规则
  • 在RNA生物学,RNA生物学.

背景情况:

  • 的使用偏差显著影响基因表达水平.
  • 以前,代码子使用效应主要与依赖翻译的过程有关.

研究的目的:

  • 为了确定调解基因表达在全基因组中的子使用效应的因素.
  • 研究CCR4-NOT复合体和核因子在代使用依赖基因表达中的作用.

主要方法:

  • 无偏见的全基因组查以确定相关因素.
  • 分析CCR4-NOT复合体子单元CNOT4和核因子,如RNA外体和PAXT复合体.

主要成果:

  • 通过对核RNA水平的转录效应,CNOT4会影响代码子使用依赖的基因表达.
  • 核外体和PAXT复合体通过RNA质量控制来调节核mRNA的稳定性.
  • 这些机制促进了mRNAs的细胞质积累,从而实现了最佳的编码子利用.

结论:

  • 核机制与共同翻译性衰变不同,对于人类细胞中的配子使用依赖基因表达至关重要.
  • 通过CNOT4的转录调节和核外体/PAXT复合体的mRNA稳定性控制都是关键参与者.