特定于年龄的基因组和转录组变异揭示了对Saccharomyces cerevisiae中调节衰老的cis-regulatory相互作用的有限证据
Kaitlin M McHugh1, Felipe S Barreto1, Molly K Burke1
1Oregon State University, 2701 SW Campus Way, Corvallis, OR 97331.
bioRxiv : the preprint server for biology
|December 22, 2025
概括
研究酵母 (Saccharomyces cerevisiae) 的衰老,这项研究结合了基因组和转录组数据,以确定影响复制寿命的因素. 研究结果表明,诸如衰老之类的复杂特征涉及超出简单的遗传亲近性之外的多层次的相互作用.
科学领域:
- 遗传学 是一个遗传学.
- 分子生物学分子生物学
- 衰老研究研究 衰老研究
背景情况:
- 发芽酵母 (Saccharomyces cerevisiae) 作为复杂特征和衰老的模型生物.
- 了解衰老的遗传和转录基因基础对于破译复杂的生物过程至关重要.
研究的目的:
- 调查导致酵母复制年龄增加的基因组和转录组因素.
- 在老龄化人口中探索遗传变异和基因表达之间的相互作用.
主要方法:
- 利用光激活细胞分类 (FACS) 来分离年轻和老的酵母队列.
- 在复合酵母种群的后代上进行全基因组测序和转录组分析.
- 在12个生物复制品中评估了核酸和转录水平的差异化.
主要成果:
- 在132个独特基因中确定了显著的遗传变异,主要是在编码区域.
- 在老年人群中发现了60个差异表达的基因 (18增加,42减少).
- 在蛋白质稳态,DNA修复和细胞循环调节方面观察到功能重叠,尽管有限的共享基因 (RFA3,WSC4).
结论:
- 晚年生存率不仅仅是由局部的cis-regulatory相互作用控制的.
- 整合基因组和转录基因组数据揭示了衰老中的复杂遗传关系.
- 多omics方法对于理解复杂的特征,如衰老,是强大的.
更多相关视频
10:39A Suppressor Screen for the Characterization of Genetic Links Regulating Chronological Lifespan in Saccharomyces cerevisiae
Published on: September 17, 2020
6.7K
11:08Combining Magnetic Sorting of Mother Cells and Fluctuation Tests to Analyze Genome Instability During Mitotic Cell Aging in Saccharomyces cerevisiae
Published on: October 16, 2014
12.8K
相关概念视频
Cis-regulatory Sequences
11.5K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
11.5K
Regulation of Expression at Multiple Steps
1.3K
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
1.3K
Replicative Cell Senescence
4.3K
Replicative cell senescence is a property of cells that allows them to divide a finite number of times throughout the organism's lifespan while preventing excessive proliferation. Replicative senescence is associated with the gradual loss of the telomere — short, repetitive DNA sequences found at the end of the chromosomes. Telomeres are bound by a group of proteins to form a protective cap on the ends of chromosomes. Embryonic stem cells express telomerase — an enzyme that adds...
4.3K
