多模式分布外的个体不确定性量化增强了对多药理学的结合亲和力预测
Amitesh Badkul1, Li Xie2, Shuo Zhang2,3
1PhD Programs in Computer Science, The Graduate Center, The City University of New York, New York City, NY, USA.
Nature machine intelligence
|January 15, 2026
概括
我们开发了eMOSAIC,这是一种用于预测药物向相互作用的新方法. 这种方法提高了多药理学的准确性和可扩展性,使得复杂疾病的新药的发现成为可能.
科学领域:
- 计算化学是一种计算化学.
- 机器学习是机器学习.
- 药物发现 药物发现
背景情况:
- 多药理学,使用单一药物向多种蛋白质,为未满足的医疗需求提供了潜力.
- 准确,可靠和可扩展的预测蛋白质 - 配体结合亲和力对于多药理学至关重要.
- 当前的机器学习方法在预测新型化合物的结合亲和力,量化不确定性和扩展到大型化合物库方面面临挑战.
研究的目的:
- 解决多目标绑定亲和力预测现有方法的局限性.
- 引入一种模型不可知的不确定性量化方法,以提高预测稳定性.
- 为了实现可扩展和准确的预测,用于多药理学应用.
主要方法:
- 开发了嵌入Mahalanobis异常评分和异常识别通过集群 (eMOSAIC),一种基于模型异常检测的不确定性量化方法.
- eMOSAIC通过测量已知和未见数据表示之间的差异来量化个体预测不确定性.
- 集成的eMOSAIC与多模式深度神经网络和结构信息化蛋白质语言模型进行多目标结合亲和力预测.
主要成果:
- 与最先进的方法相比,eMOSAIC在分布之外的环境中表现出更好的表现.
- 该方法有效地量化了预测不确定性,以化合物为化合物为基础.
- 综合模型在预测蛋白质 - 配体结合亲和力方面显著改善.
结论:
- eMOSAIC克服了多目标结合亲和力预测的关键挑战,包括对新型化合物的概括和不确定性量化.
- 拟议的方法提供了一个可扩展的解决方案,用于在大型复合库中预测绑定亲和关系.
- eMOSAIC具有很大的潜力,可以推进多药理学和其他需要强大的预测的药物发现应用.
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