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DNA Base Pairing02:27

DNA Base Pairing

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Erwin Chargaff’s rules on DNA equivalence paved the way for the discovery of base pairing in DNA. Chargaff’s rules state that in a double-stranded DNA molecule,
33.0K
DNA Base Pairing02:27

DNA Base Pairing

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31.9K
VSEPR Theory and the Effect of Lone Pairs04:01

VSEPR Theory and the Effect of Lone Pairs

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Effect of Lone Pairs of Electrons on Molecule Geometry
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Frequency-dependent Selection01:21

Frequency-dependent Selection

23.1K
When the fitness of a trait is influenced by how common it is (i.e., its frequency) relative to different traits within a population, this is referred to as frequency-dependent selection. Frequency-dependent selection may occur between species or within a single species. This type of selection can either be positive—with more common phenotypes having higher fitness—or negative, with rarer phenotypes conferring increased fitness.
23.1K
Sign Test for Matched Pairs01:17

Sign Test for Matched Pairs

386
The sign test for matched pairs offers a robust method for comparing two paired samples, often for the effects of an intervention in one of them. This method is very useful in situations where the underlying distribution of the data is unknown. The test compares two related samples—often pre- and post-treatment measurements on the same subjects—to determine if there are significant differences in their median values.
To conduct the sign test, we first calculate the differences in...
386
Maturation of Endosomes01:28

Maturation of Endosomes

5.7K
The early endosome containing internalized molecules matures through transformations in its location, morphology, intraluminal pH, and membrane protein composition. Together, these changes result in a more acidic late endosome that contains multiple intraluminal vesicles; therefore, the late endosome is also called a multivesicular body (MVB).
Changes in location
The maturing endosome moves along microtubules from the periphery of the cell towards the perinuclear region. This movement of the...
5.7K

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相关实验视频

Updated: Jan 22, 2026

Identification of Mouse and Human Antibody Repertoires by Next-Generation Sequencing
08:51

Identification of Mouse and Human Antibody Repertoires by Next-Generation Sequencing

Published on: March 15, 2019

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深度生成模型捕获了人类抗体中成熟度依赖的配对模式.

Lea Brönnimann1,2, Thomas Lemmin1, Chiara Rodella1,2

  • 1Institute of Biochemistry and Molecular Medicine (IBMM), University of Bern, 3012 Bern, Switzerland.

iScience
|January 21, 2026
PubMed
概括

我们开发了一个深度学习框架,可以从重链中预测抗体轻链. 这种方法产生了可信的抗体对,有助于免疫谱系分析和治疗抗体设计.

科学领域:

  • 免疫学 免疫学 免疫学
  • 生物信息学是一种生物信息学.
  • 计算生物学 计算生物学

背景情况:

  • 抗体重光链配对对免疫系统功能和治疗性抗体的发展至关重要.
  • 现有的序列数据库往往缺乏必要的对抗体链信息.
  • 准确的配对数据对于理解免疫谱系架构至关重要.

研究的目的:

  • 开发一个计算框架,以基于重链序列来预测抗体轻链.
  • 为了弥补序列数据库内对抗体链数据中的差距.
  • 为了生成可信的抗体对,以改善谱系分析和治疗设计.

主要方法:

  • 采用了两阶段的深度学习框架.
  • 基于变压器的语言模型在未配对的抗体序列上进行了预训练.
  • 使用序列对序列模型,从重链输入生成轻链.

主要成果:

  • 生成的抗体序列显示出高生殖系相同性和改善的结构质量.
  • 该模型实现了本地轻链的适度恢复.
  • 分析显示,来自记忆B细胞的重链中存在成熟度依赖的选择.
  • 生成的kappa光链显示了三模态相似分布,表明了不同的配对模式.
关键词:
人工智能的人工智能是人工智能.免疫学 免疫学 免疫学结构生物学是结构生物学.

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Quantification of Antibody-dependent Enhancement of the Zika Virus in Primary Human Cells

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Generation of Human Adipose Stem Cells through Dedifferentiation of Mature Adipocytes in Ceiling Cultures
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Generation of Human Adipose Stem Cells through Dedifferentiation of Mature Adipocytes in Ceiling Cultures

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相关实验视频

Last Updated: Jan 22, 2026

Identification of Mouse and Human Antibody Repertoires by Next-Generation Sequencing
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Identification of Mouse and Human Antibody Repertoires by Next-Generation Sequencing

Published on: March 15, 2019

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Quantification of Antibody-dependent Enhancement of the Zika Virus in Primary Human Cells
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Quantification of Antibody-dependent Enhancement of the Zika Virus in Primary Human Cells

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Generation of Human Adipose Stem Cells through Dedifferentiation of Mature Adipocytes in Ceiling Cultures
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结论:

  • 序列对序列建模可以有效地揭示抗体中的链际依赖性.
  • 开发的框架可以生成可信的抗体对,增强计算谱分析.
  • 这种方法为设计具有特定配对特征的新型治疗抗体提供了基础.