通过转录组测序识别神秘的KMT2A-PTD和其他新型融合基因,改变了AML-NK中的分子风险分层
Angeli Ambayya1,2, Rozaimi Razali3, Sarina Sulong4
1Department of Haematology, School of Medical Sciences, Health Campus, Universiti Sains Malaysia, Kubang Kerian, Kelantan, 16150, Malaysia.
概括
RNA测序确定了27个融合基因,包括像LATS2::SAP18这样的新型基因,在正常型 (AML-NK) 的急性髓性白血病中. 这可以改善AML-NK患者的预后风险评估和治疗策略.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 在瘤学瘤学.
背景情况:
- 具有正常型的急性髓性白血病 (AML-NK) 是一个异质的子组,结果可变.
- 目前的分类缺乏AML-NK的足够分子分层.
- 识别新的遗传变异对于完善预后和治疗至关重要.
研究的目的:
- 在AML-NK中使用高通量深度测序识别神秘和新型融合基因.
- 分析这些融合基因的预后影响.
- 评估RNA测序对AML-NK风险分层的有用性.
主要方法:
- 来自51名AML-NK患者的RNA的高通量深度测序.
- 利用阿里巴和STAR融合管道进行融合基因检测.
- 集成识别的融合基因与ELN 2022风险重新分类的标准.
主要成果:
- 确定了68个融合基因发现,涉及27个不同的融合基因,其中70%是新发现.
- 最常见的新型合并是LATS2::SAP18 (17.6%) 和HOXA3::HOXA9 (15.7%).
- 根据ELN 2022标准,预后融合基因的整合将73%的中等风险患者重新归类为低风险患者.
结论:
- RNA测序揭示了AML-NK中的显著的转录组复杂性.
- 新的融合基因,特别是LATS2::SAP18,具有潜在的预后价值.
- 融合基因检测增强了预后评估,并有助于在AML-NK中制定治疗策略.
更多相关视频
09:49Oncogenic Gene Fusion Detection Using Anchored Multiplex Polymerase Chain Reaction Followed by Next Generation Sequencing
Published on: July 5, 2019
10.0K
09:01Integrate Imaging Flow Cytometry and Transcriptomic Profiling to Evaluate Altered Endocytic CD1d Trafficking
Published on: October 29, 2018
7.1K
相关概念视频
Nuclear Fusion
33.7K
The process of converting very light nuclei into heavier nuclei is also accompanied by the conversion of mass into large amounts of energy, a process called fusion. The principal source of energy in the sun is a net fusion reaction in which four hydrogen nuclei fuse and ultimately produce one helium nucleus and two positrons.
A helium nucleus has a mass that is 0.7% less than that of four hydrogen nuclei; this lost mass is converted into energy during the fusion. This reaction produces about...
A helium nucleus has a mass that is 0.7% less than that of four hydrogen nuclei; this lost mass is converted into energy during the fusion. This reaction produces about...
33.7K
What is Gene Expression?
195.1K
Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
195.1K
Alterations in Respiration II
1.7K
There are numerous types of normal and abnormal respiration. Based on ventilatory movements, breathing patterns are classified as regular, deep, or shallow. Examples include Biot's breathing, Cheyne-Stokes respiration, Kussmaul's breathing, hyperventilation, and hypoventilation. Each pattern is clinically significant and aids in evaluating patients.
In Biot's breathing, the respiratory rate and depth are irregular, alternating between periods of deep gasping and apnea. Common causes...
In Biot's breathing, the respiratory rate and depth are irregular, alternating between periods of deep gasping and apnea. Common causes...
1.7K
Altered States of Awareness
1.0K
Altered states of consciousness represent significant deviations from one's normal mental state. These deviations can range from subtle changes in awareness to profound transformations in perception, thought processes, and sensory experiences. Altered states of consciousness can be triggered by various factors, including drug use, meditation, hypnosis, illness, or even intense fatigue.
The ingestion of substances like stimulants or hallucinogens leads to chemical alterations in the brain...
The ingestion of substances like stimulants or hallucinogens leads to chemical alterations in the brain...
1.0K
Relative Risk
2.0K
Relative risk (RR) is a statistical measure commonly used in epidemiology to compare the likelihood of a particular event occurring between two groups. This metric is important for evaluating the relationship between exposure to a specific risk factor and the probability of a particular outcome. It plays a crucial role in medical research, public health studies, and risk assessment. Relative risk quantifies how much more (or less) likely an event is to occur in an exposed group compared to an...
2.0K
Cis-regulatory Sequences
11.6K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
11.6K
