相关实验视频
Updated: Jan 29, 2026

10:16
Mining Spatial Transcriptomics Datasets using DeepSpaceDB
Published on: September 5, 2025
706
精子生成的时空动力学:从小鼠丸中的高分辨率空间转录学和伪时间轨迹的洞察力
Han Liang1, Jianlong Sun1, Zaoxu Xu1
1Shenzhen Salus BioMed Co., Ltd., Shenzhen, Guangdong, China.
Frontiers in reproductive health
|January 28, 2026
概括
高分辨率的空间转录学揭示了小鼠丸中精子生产的分子动态. 这项研究绘制了沿着发育轴的基因表达图,确定了与男性不孕症相关的关键基因.
科学领域:
- 生殖生物学 生殖生物学
- 基因组学就是基因组学.
- 分子生物学分子生物学
背景情况:
- 精子生成,即精子生产的过程,是复杂的,在分子层面上还没有完全理解.
- 像组织学和scRNA-seq这样的现有方法在解决空间和分子细节方面存在局限性.
- 传统的空间转录学缺乏小丸细胞所需的分辨率,导致混合信号.
研究的目的:
- 在单细胞分辨率下描述小鼠丸的空间转录形状.
- 为了识别种子管内分子标记物和发育轴.
- 提供关于精子生成和男性生殖生物学的时空动态的见解.
主要方法:
- 使用Salus-STS高分辨率空间转录组学 (≥1μm分辨率).
- 采用Salus Cellbins算法进行单细胞水平分析.
- 集成空间数据与scRNA-seq使用RCTD用于细胞亚型注释.
主要成果:
- 标注主要细胞亚型,确认与组织学数据的对齐.
- 使用伪时间和空间梯度分析揭示了底层膜到光线的发育轴.
- 确定了与精子成熟相关的光基因 (例如Prm2) 和与线粒体代谢相关的基因 (例如mt-Nd4).
结论:
- 高分辨率的空间转录使精子生成的详细剖析成为可能.
- 确定了具有男性不孕症潜在诊断价值的关键基因 (Prm2,mt-Nd4).
- 为管理男性生殖健康的分子机制提供了新的见解.
相关概念视频
Spermatogenesis
122.8K
Spermatogenesis is the process by which haploid sperm cells are produced in the male testes. It starts with stem cells located close to the outer rim of seminiferous tubules. These spermatogonial stem cells divide asymmetrically to give rise to additional stem cells (meaning that these structures “self-renew”), as well as sperm progenitors, called spermatocytes. Importantly, this method of asymmetric mitotic division maintains a population of spermatogonial stem cells in the male...
122.8K
Spermatogenesis
9.4K
Spermatogenesis is a complex process that involves the development of sperm cells from undifferentiated stem cells in the seminiferous tubules of the testes. The process is essential for the production of mature and functional sperm cells that are capable of fertilizing an egg.
The process of spermatogenesis can be divided into mitosis, meiosis, and spermiogenesis. During mitosis, the spermatogonia or stem cells divide to produce two identical daughter cells, type A and B spermatogonia. Type-A...
The process of spermatogenesis can be divided into mitosis, meiosis, and spermiogenesis. During mitosis, the spermatogonia or stem cells divide to produce two identical daughter cells, type A and B spermatogonia. Type-A...
9.4K
Orthogonal Trajectories
47
Orthogonal trajectories describe the geometric relationship between two families of curves that intersect each other at right angles. One illustrative case involves a family of parabolas that open sideways along the x-axis. These curves share a common shape but differ by a scaling parameter, resulting in a set of curves that all pass through the origin and widen at different rates.Determining Orthogonal TrajectoriesTo identify the orthogonal trajectories for these parabolas, the first step...
47
Dynamic Equilibrium
62.4K
A reversible chemical reaction represents a chemical process that proceeds in both forward (left to right) and reverse (right to left) directions. When the rates of the forward and reverse reactions are equal, the concentrations of the reactant and product species remain constant over time and the system is at equilibrium. A special double arrow is used to emphasize the reversible nature of the reaction. The relative concentrations of reactants and products in equilibrium systems vary greatly;...
62.4K
Depth Perception and Spatial Vision
2.0K
Depth perception is the ability to perceive objects three-dimensionally. It relies on two types of cues: binocular and monocular. Binocular cues depend on the combination of images from both eyes and how the eyes work together. Since the eyes are in slightly different positions, each eye captures a slightly different image. This disparity between images, known as binocular disparity, helps the brain interpret depth. When the brain compares these images, it determines the distance to an object.
2.0K
Chromatographic Resolution
2.1K
In chromatography, a solute moves through a chromatographic column and tends to spread, forming a Gaussian-shaped band. The longer the solute spends in the column, the broader the band becomes. The broadening can lead to overlaps within the column, affecting separation effectiveness.
The effectiveness of separation can be evaluated by determining the level of separation between two neighboring peaks in a chromatogram, which represents the individual components of a sample.
In chromatography,...
The effectiveness of separation can be evaluated by determining the level of separation between two neighboring peaks in a chromatogram, which represents the individual components of a sample.
In chromatography,...
2.1K

