vEMINR:用于体积电子显微镜的超快速同位素重建,具有隐式神经表示
Jibin Yang1,2,3, Jie Huo4, Muyu Liu1
1School of Software, Shandong University, Jinan, China.
Advanced science (Weinheim, Baden-Wurttemberg, Germany)
|January 30, 2026
概括
我们开发了vEMINR,这是3D电子显微镜重建的快速方法. 这种隐性神经表示方法提高了图像质量,并加速了大型数据集的处理.
科学领域:
- 神经科学是一个神经科学.
- 生物物理学的生物物理.
- 计算生物学 计算生物学
背景情况:
- 卷电子显微镜 (vEM) 提供纳米级生物结构的3D可视化.
- 由于切割限制,vEM患有异型分辨率,轴向分辨率明显低于横向分辨率.
研究的目的:
- 介绍vEMINR,一种基于超快速隐性神经表示 (INR) 的方法,用于同位体vEM图像重建.
- 通过学习真正的降解模式来提高vEM图像质量,并使用INR的高效参数化加速重建.
主要方法:
- 开发了vEMINR,这是用于vEM图像重建的隐式神经表示 (INR) 方法.
- 利用INR的连续函数表示和高效的参数化来加速处理.
- 训练模型从低分辨率的VEM图像中学习真正的降解模式.
主要成果:
- 与主流方法相比,vEMINR在11个公共数据集中实现了十倍以上的快速重建.
- 从vEM数据重建器官和神经元的准确性显著提高.
- 保持了重建准确度,同时实现了千兆字节规模的vEM数据集的高吞吐量处理.
结论:
- vEMINR为vEM数据集的重建速度和准确性提供了显著的改进.
- 该方法的效率促进了大规模的vEM图像分析和相关研究.
- vEMINR准备成为先进的生物成像和研究中的重要工具.
相关概念视频
Control Volume and System Representations
1.6K
Two key frameworks are employed to analyze mass, energy, and momentum transfer: the control volume approach and the system approach. These frameworks offer different perspectives, depending on whether the focus is on a specific region in space (control volume approach) or a defined mass of fluid (system approach).
The control volume approach considers a stationary region in space through which fluid flows. This region is bounded by a control surface. For instance, in the case of water...
The control volume approach considers a stationary region in space through which fluid flows. This region is bounded by a control surface. For instance, in the case of water...
1.6K
Electron Microscope Tomography and Single-particle Reconstruction
2.9K
Transmission electron microscopy (TEM) can be used to determine the 3D structure of biological samples with the help of techniques such as electron microscope tomography and single-particle reconstruction. While single-particle reconstruction can examine macromolecules and macromolecular complexes in vitro conditions only, tomography permits the study of cell components or small cells in vivo.
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
Electron Tomography
Electron tomography can be performed either in TEM or STEM (scanning transmission...
2.9K
Overview of Electron Microscopy
14.5K
The wavelengths of visible light ultimately limit the maximum theoretical resolution of images created by light microscopes. Most light microscopes can only magnify 1000X, and a few can magnify up to 1500X. Electrons, like electromagnetic radiation, can behave like waves, but with wavelengths of 0.005 nm, they produce significantly greater resolution up to 0.05 nm as compared to 500 nm for visible light. An electron microscope (EM) can create a sharp image that is magnified up to 2,000,000X.
14.5K
Scanning Electron Microscopy
5.5K
A scanning electron microscope (SEM) is used to study the surface features of a sample by using an electron beam that scans the sample surface in a two-dimensional manner. Typically, areas between ~1 centimeter to 5 micrometers in width can be imaged. SEM can be used to image bacteria, viruses, tissues as well as larger samples like insects. Conventional SEM gives a magnification ranging from 20X to 30,000X and spatial resolution of 50 to 100 nanometers.
Fundamental Principles
Accelerated...
Fundamental Principles
Accelerated...
5.5K
Transmission Electron Microscopy
7.2K
In 1931, physicist Ernst Ruska—building on the idea that magnetic fields can direct an electron beam just as lenses can direct a beam of light in an optical microscope—developed the first prototype of the electron microscope. This development led to the development of the field of electron microscopy. In the transmission electron microscope (TEM), electrons are produced by a hot tungsten element and accelerated by a potential difference in an electron gun, which gives them up to 400...
7.2K
Immunogold Electron Microscopy
5.5K
Immunoelectron microscopy utilizes immunogold labeling of endogenous proteins with specific antibodies to detect and localize these proteins in cells and tissues. The procedure provides insights into the distribution and quantification of protein under different stimulation conditions offering clues about their functions. Conjugating highly electron-dense gold particles with primary or secondary antibodies allow antigen detection on and within cells, with high resolution and specificity.
5.5K


