长胡须鱼Mystus gulio (汉密尔顿,1822) 的染色体水平基因组和全长转录组
Sudheesh K Prabhudas1, Vinaya Kumar Katneni1, Ashok Kumar Jangam1
1ICAR-Central Institute of Brackishwater Aquaculture, 75, Santhome High Road, MRC Nagar, Chennai, 600028, Tamil Nadu, India.
Scientific data
|February 4, 2026
概括
研究人员对长胡须鱼 (Mystus gulio) 的基因组进行了测序,这是一种水鱼. 这为了解其营养潜力以及未来的育种和进化研究提供了宝贵的遗传资源.
科学领域:
- 基因组学就是基因组学.
- 水产养殖是水产养殖的一种方式.
- 鱼类生物学 鱼类生物学
背景情况:
- 长胡须鱼 (Mystus gulio) 是一个重要的水物种.
- 了解其遗传构成对于水产养殖和保护至关重要.
研究的目的:
- 为了生成Mystus gulio. 的染色体级基因组组合.
- 在十种组织中进行全长的转录组分析.
- 为未来对M. gulio. 的研究提供基因组资源.
主要方法:
- 多平台测序:PacBio HiFi,Illumina 短读,以及Hi-C. 这三种测序可以使用.
- 基因组组装和注释. 基因组组装和注释.
- 对全长的转录组进行PacBio 异序测序.
主要成果:
- 产生了706.32 Mb的染色体级基因组组,定在29个染色体上.
- 基因组的完整性为98.1% (BUSCO分析).
- 从转录组数据中预测了23339个编码蛋白质的基因,并进行了异型分类和替代拼接分析.
结论:
- 这项研究提供了Mystus gulio.的高质量的基因组组装和转录组数据.
- 这些基因组资源将促进对营养潜力,生态功能,遗传改进,分子育种和进化研究的研究.
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