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Once a ligand binds to a receptor, the signal is transmitted through the membrane and into the cytoplasm. The continuation of a signal in this manner is called signal transduction. Signal transduction only occurs with cell-surface receptors, which cannot interact with most components of the cell, such as DNA. Only internal receptors can interact directly with DNA in the nucleus to initiate protein synthesis. When a ligand binds to its receptor, conformational changes occur that affect the...
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Rab Cascades
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从H&E图像中预测蛋白级联表达.
medRxiv : the preprint server for health sciences
|February 6, 2026
概括
预测癌症下游蛋白质表达是至关重要的. 一个新的细胞级人工智能模型CellViT成功地从病理图像中预测了亡级联蛋白质,优于传统的补丁级方法.
科学领域:
- 计算病理学计算病理学
- 人工智能在瘤学中的应用
- 生物医学数据分析
背景情况:
- 在瘤性途径中蛋白质表达是癌症发展的关键.
- 预测下游蛋白质信号对于了解癌症进展至关重要.
- 目前的AI模型通常预测单个蛋白质,缺乏对信号传播的洞察力.
研究的目的:
- 开发和评估一种人工智能模型,用于预测乳腺癌下游蛋白质表达.
- 为了比较细胞级视觉变压器 (ViT) 与补丁级视觉变压器 (ViT) 在此任务中的性能.
- 评估细胞亡和DNA损伤/修复 (DDR) 级联对预测蛋白质表达的有用性.
主要方法:
- 利用了TCGA-BRCA数据集中的反相蛋白阵列 (RPPA) 和整片图像 (WSI).
- 开发了一个细胞级ViT模型 (CellViT),并将其与补丁级ViT模型进行比较.
- 专注于预测亡级联中的五个关键蛋白质,使用DDR级联作为控制.
主要成果:
- 补丁级ViT模型未能获得统计学上显著的预测结果 (R平方值<0.1).
- 细胞ViT显示了预测能力,在五个测试折叠中实现R平方值>0.1.
- 由于亡级联在形态上具有指示性,其预测性能明显高于DDR级联.
结论:
- 像CellViT这样的细胞级人工智能模型在预测WSI下游蛋白质表达方面比补丁级模型更有效.
- 形态相关的生物通路,如亡,是人工智能驱动的蛋白质表达预测的更好的目标.
- 这种方法提供了一种新的方法来推断癌症中的功能性蛋白质信号传递.


