遗传基因组合成揭示了阿斯特拉属植物中古赫萨普洛伊德衍生的基因组块
Tao Feng1, Michael McKibben2, John Lovell3,4
1Biosystematics Group, Department of Plant Sciences, Wageningen University and Research, Wageningen 6708 PB, The Netherlands.
概括
星座科 (Asteraceae) 是一个属植物的家族.
科学领域:
- 植物基因组学 植物基因组学
- 进化生物学是进化的生物学.
- 人类遗传学 是一个学科.
背景情况:
- 星科 (Compositae) 家族是最大的开花植物家族,以其多样性而闻名.
- 一个古老的全基因组三倍化事件发生在它的进化辐射期间.
研究的目的:
- 为了研究Asteraceae进化中古六化事件的基因组后果.
- 为了重建祖先的Asteraceae基因组,并分析基因动态后三重复.
主要方法:
- 对23个Asterales基因组进行了以synteny为导向的基因组学分析.
- 识别保存的基因组块,跟踪它们的进化动态.
- 对基因分离和保留模式的分析.
主要成果:
- 确定了16个祖先基因组,并将其三倍化成48个代表祖先基因组的块.
- 现代的Asteraceae基因组是由基因组交换和重新排列形成的马赛克.
- 157个基因保留了三种古类衍生合成对应物,包括转录因子和辅酶相关基因.
结论:
- 古六化显著塑造了阿斯特拉属的基因组进化,创造了遗传马赛克.
- 保留的三倍基因,特别是那些参与花发育的基因,是家庭创新的关键.
- 建立的框架有助于表征新的Asteraceae基因组并理解进化创新.
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