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相关概念视频

Genetic Screens02:46

Genetic Screens

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Genetic screens are tools used to identify genes and mutations responsible for phenotypes of interest. Genetic screens help identify individuals or a group of people at risk of developing  genetic diseases and help them with early intervention, targeted therapy, and reproductive options.
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which...
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Facilitated Transport01:19

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The chemical and physical properties of plasma membranes cause them to be selectively permeable. Since plasma membranes have both hydrophobic and hydrophilic regions, substances need to be able to transverse both regions. The hydrophobic area of membranes repels substances such as charged ions. Therefore, such substances need special membrane proteins to cross a membrane successfully. In  facilitated transport, also known as facilitated diffusion, molecules and ions travel across a...
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Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
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In 1928, bacteriologist Frederick Griffith worked on a vaccine for pneumonia, which is caused by Streptococcus pneumoniae bacteria. Griffith studied two pneumonia strains in mice: one pathogenic and one non-pathogenic. Only the pathogenic strain killed host mice.
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Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
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Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
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相关实验视频

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Tuning a Parallel Segmented Flow Column and Enabling Multiplexed Detection
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dHyperCas12a可以实现多重的CRISPRi屏幕.

Schuyler M Melore1,2,3,4, Christian D McRoberts Amador3,4,5, Marisa C Hamilton1,3,4

  • 1University Program in Genetics & Genomics, Duke University, Durham, NC, USA.

Nature communications
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此摘要是机器生成的。

研究人员开发了一种新的CRISPR工具,dHyperLbCas12a,用于精确控制基因和cis-regulatory元素活动. 该系统使得高度多重化的基因表达研究和各种细胞类型的操纵成为可能.

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科学领域:

  • 分子生物学分子生物学
  • 遗传学 是一个遗传学.
  • 基因规则 基因规则

背景情况:

  • 基因和 cis-调节元素 (CRE) 相互作用对生物过程至关重要.
  • 克里斯普尔屏幕可以评估基因/CRE活动,但相互作用分析是有限的.

研究的目的:

  • 开发一个高效,高度多重化的监管要素活动控制系统.
  • 为了能够剖析CREs对基因表达的独立和组合贡献.

主要方法:

  • 结合了一个高效的dCas12a (dHyperLbCas12a) 与长的CRISPRRNA (crRNA) 阵列.
  • 使用RNA聚合酶II来表达crRNA数组.
  • 应用dHyperLbCas12a用于同时激活和抑制.

主要成果:

  • 使用激活和抑制域证明了基因表达的多重控制.
  • 成功地将该系统应用于培养的原发性免疫细胞和iPSC分化.
  • 展示了剖析独立和组合CRE贡献的能力.

结论:

  • 该dHyperLbCas12a系统提供了高效的,高度多重化的基因表达控制.
  • 这项技术扩大了在各种生物系统中研究基因调节的可能性.
  • 能够详细分析 cis 调节元件的功能和相互作用.