对内源生物分子凝聚物和相分离蛋白的高通量识别
Pengjie Li1, Fukang Qi1, Wenjie Zhu1
1Key Laboratory of Molecular Biophysics of MOE and Hubei Bioinformatics and Molecular Imaging Key Laboratory, Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China.
Nature protocols
|February 12, 2026
概括
研究人员开发了一种新的高通量方法来识别细胞中的相分离蛋白. 该技术通过分析蛋白质密度变化,有助于理解生物分子凝聚物及其在疾病中的作用.
科学领域:
- 细胞生物学 细胞生物学
- 生物化学 生物化学
- 蛋白质组学是指蛋白质组学.
背景情况:
- 生物分子凝结物通过液-液相分离来调节细胞功能.
- 这些凝聚物的失调与各种疾病有关.
- 目前用于识别分相蛋白的现有方法缺乏吞吐量和动态响应分析.
研究的目的:
- 开发一种系统的,高通量协议,用于识别内源相隔蛋白和凝结物.
- 为了捕捉对细胞刺激的反应中蛋白质相分离的动态变化.
- 为了实现蛋白质密度分数的全蛋白质分析和相分离事件的时间解析.
主要方法:
- 使用透压缩或转化生长因子-β (TGF-β) 处理诱导凝结物形成.
- 基于密度变化的凝析物分离,使用糖糖密度梯度离心法.
- 定量质谱法用于分相蛋白的高通量识别.
主要成果:
- 在诱导条件下,在H1975细胞中鉴定出超过1500个相分离蛋白.
- 发现了538种新型候选分相蛋白,这些蛋白在PhaSepDB中以前没有被目录.
- 证明了该方法能够检测构成和动态调节的冷凝物.
结论:
- 开发的协议提供了一个强大的工具,用于对生物分子凝聚物的系统性,高通量蛋白质组范围的分析.
- 这种方法通过提供时间分辨率来推进与疾病相关的相分离机制的研究.
- 能够更深入地了解由液-液相分离调节的细胞过程.
相关概念视频
Phase Transitions: Vaporization and Condensation
21.6K
The physical form of a substance changes on changing its temperature. For example, raising the temperature of a liquid causes the liquid to vaporize (convert into vapor). The process is called vaporization—a surface phenomenon. Vaporization occurs when the thermal motion of the molecules overcome the intermolecular forces, and the molecules (at the surface) escape into the gaseous state. When a liquid vaporizes in a closed container, gas molecules cannot escape. As these gas phase molecules...
21.6K
Aldol Condensation vs Claisen Condensation
8.0K
Aldol condensation is an acid or base-catalyzed condensation between aldehydes or ketones to give an α,ꞵ-unsaturated carbonyl compound. A base-promoted condensation between ester molecules to produce a ꞵ-ketoester is known as the Claisen condensation. In the presence of a base, both reactions involve deprotonation of the acidic α hydrogen to produce the corresponding enolates. The nucleophilic enolates attack their respective nonenolized carbonyl compound forming a tetrahedral...
8.0K
Phase Transitions
23.3K
Whether solid, liquid, or gas, a substance's state depends on the order and arrangement of its particles (atoms, molecules, or ions). Particles in the solid pack closely together, generally in a pattern. The particles vibrate about their fixed positions but do not move or squeeze past their neighbors. In liquids, although the particles are closely spaced, they are randomly arranged. The position of the particles are not fixed—that is, they are free to move past their neighbors to...
23.3K
Phase Diagrams
50.5K
A phase diagram combines plots of pressure versus temperature for the liquid-gas, solid-liquid, and solid-gas phase-transition equilibria of a substance. These diagrams indicate the physical states that exist under specific conditions of pressure and temperature and also provide the pressure dependence of the phase-transition temperatures (melting points, sublimation points, boiling points). Regions or areas labeled solid, liquid, and gas represent single phases, while lines or curves represent...
50.5K
Aldol Condensation with β-Diesters: Knoevenagel Condensation
3.8K
The Knoevenagel condensation is an aldol-type reaction involving the condensation of aldehydes or ketones with active methylene compounds such as β-diesters to produce substituted olefins.
3.8K
C–C Bond Formation: Aldol Condensation Overview
16.4K
Aldol condensation is an important route in synthetic organic chemistry used to generate a new carbon–carbon bond under basic or acidic conditions. The aldol condensation reaction presented in Figure 1 constitutes an aldol addition reaction followed by the dehydration process.
16.4K


