用定量CEST和实时展开的NMR测量检测了一种动力学陷入的热力学不稳定的蛋白质中缓慢的5F-Trp动力学
Arathrika Pramanik1, R Aishwarya Bhuvaneshwari1, Ishita Sengupta1
1Department of Chemistry, IIT Bombay Powai, Mumbai 400076, India.
The journal of physical chemistry letters
|February 13, 2026
概括
这项研究揭示了RfaH蛋白中的F核.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 核磁共振 (NMR) 光谱学 核磁共振 (NMR) 光谱学
背景情况:
- RfaH的C端域 (CTD) 是一种具有复杂动态的折叠切换蛋白.
- 了解蛋白质构造交换对于破译生物功能至关重要.
研究的目的:
- 为了研究RfaH CTD的毫秒秒时间尺度的形状交换.
- 用先进的NMR技术来描述动力学上被困的原生状态的动态.
主要方法:
- 使用了定量阶段循环F CEST NMR测量.
- 实时展开,EXSY和线宽分析被结合起来进行全面的数据解释.
主要成果:
- 在原生状态下,在埋葬和暴露于溶剂的环境之间观察到F核交换.
- 透析TMAO和基线的apodization有助于分析因蛋白质展开而复杂的缓慢交换动力学.
结论:
- 该研究成功地区分了人口稀少的构造和全球展开的物种.
- F CEST NMR 是一种强大的工具,用于探测复杂蛋白质系统中的缓慢动态.
相关概念视频
Third Law of Thermodynamics
22.2K
A pure, perfectly crystalline solid possessing no kinetic energy (that is, at a temperature of absolute zero, 0 K) may be described by a single microstate, as its purity, perfect crystallinity,and complete lack of motion means there is but one possible location for each identical atom or molecule comprising the crystal (W = 1). According to the Boltzmann equation, the entropy of this system is zero.
22.2K
The Unfolded Protein Response
6.5K
The ER is the hub of protein synthesis in a cell. It has robust systems to quality control protein folding and also for degradation of terminally misfolded proteins. Under normal conditions, a small proportion of misfolded proteins that cannot be salvaged need to be transported to the cytoplasm by the ER-associated degradation or ERAD pathways. However, if the ERAD cannot handle the misfolded proteins, the cell activates the unfolded protein response or UPR to adjust the protein folding...
6.5K
First Law of Thermodynamics
41.2K
Energy Conservation
41.2K
First Law of Thermodynamics
81.3K
The First Law of Thermodynamics states that energy cannot be created or destroyed, only transformed. This can be demonstrated within a classic food web where light energy from the sun is harnessed as radiant energy by plants, converted into chemical energy, and stored as complex carbohydrates. The vegetation is then consumed by animals and during the digestion process, the sugars release energy as heat. The sugars also produce chemical energy that either gets used up doing work, stored in...
81.3K
Second Law of Thermodynamics
27.2K
In the quest to identify a property that may reliably predict the spontaneity of a process, a promising candidate has been identified: entropy. Processes that involve an increase in entropy of the system (ΔS > 0) are very often spontaneous; however, examples to the contrary are plentiful. By expanding consideration of entropy changes to include the surroundings, a significant conclusion regarding the relation between this property and spontaneity may be reached. In thermodynamic models, the...
27.2K
Second Law of Thermodynamics
69.0K
The Second Law of Thermodynamics states that entropy, or the amount of disorder in a system, increases each time energy is transferred or transformed. Each energy transfer results in a certain amount of energy that is lost—usually in the form of heat—that increases the disorder of the surroundings. This can also be demonstrated in a classic food web. Herbivores harvest chemical energy from plants and release heat and carbon dioxide into the environment. Carnivores harvest the...
69.0K


