一个基因的编码子使用和细胞tRNA供应之间的轻微不匹配是有益的
Feng Chen1,2, Yao Liu1,2, Ziwei Zhou2
1Advanced Medical Technology Center, The First Affiliated Hospital, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China.
Nature communications
|February 17, 2026
概括
最佳的基因表达涉及代使用偏差和tRNA供应之间的轻微不匹配,平衡翻译成本和功能效益. 这一发现挑战了对代码子使用偏差优化的传统观点.
科学领域:
- 分子生物学分子生物学
- 进化生物学 进化生物学
- 遗传学 是一个遗传学.
背景情况:
- 使用偏差 (CUB) 在物种中普遍存在,通常被认为通过匹配细胞tRNA供应来优化基因表达.
- 这种优化被认为是由自然选择驱动的,以实现高效的翻译.
研究的目的:
- 调查一个最佳CUB涉及与tRNA供应轻微不匹配的假设,平衡翻译成本和功能回报.
- 挑战对CUB单向选择的传统理解.
主要方法:
- 在抗生素选择下,在细菌耐药性基因中实验性修改CUB.
- 开发一个模型来解释功能回报和转化成本之间的平衡.
- 在模型生物体中进行基因组分析,以评估内源基因中的CUB-tRNA不匹配.
主要成果:
- 一个小的CUB-tRNA不匹配,而不是最小化,在选择下增强了细菌生长.
- 不匹配的最佳程度因基因重要性和环境条件 (抗生素度) 而有所不同.
- 基因组数据表明,具有较低功能重要性和较高mRNA丰度的基因具有更大的最佳不匹配.
结论:
- 最佳的CUB-tRNA关系是功能回报和翻译成本之间的平衡,而不仅仅是通过最小化翻译负载来驱动.
- 改变CUB-tRNA不匹配的突变通常是有害的,这表明选择性维持这种平衡.
- 这些发现挑战了对CUB优化单向选择的假设.
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