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相关概念视频

Comparing Copy Number Variations and SNPs02:26

Comparing Copy Number Variations and SNPs

18.9K
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
18.9K
Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

18.8K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
18.8K
Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

16.0K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
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Multiple Allele Traits01:49

Multiple Allele Traits

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The Concept of Multiple Allelism
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Modern Molecular Taxonomy01:29

Modern Molecular Taxonomy

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Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
775
Polygenic Traits01:18

Polygenic Traits

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When more than one gene is responsible for a given phenotype, the trait is considered polygenic. Human height is a polygenic trait. Studies have uncovered hundreds of loci that influence height, and there are believed to be many more. Due to the high number of genes involved, as well as environmental and nutritional factors, height varies significantly within a given population. The distribution of height forms a bell-shaped curve, with relatively few individuals in the population at the...
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相关实验视频

Updated: Feb 28, 2026

Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA
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Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA

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在单核酸分辨率下复杂特征变体的功能剖析.

Layla Siraj1,2,3,4, Rodrigo I Castro5, Hannah B Dewey5,6

  • 1Broad Institute of Harvard and MIT, Cambridge, MA, USA.

Nature
|February 25, 2026
PubMed
概括

这项研究功能性地描述了超过13,000种与复杂的人类特征和疾病相关的调节变异. 这些发现揭示了新的机制,包括转录因子结合和调节性表皮质,进步了我们对遗传疾病风险的理解.

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Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
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Following the Dynamics of Structural Variants in Experimentally Evolved Populations
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Following the Dynamics of Structural Variants in Experimentally Evolved Populations

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Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA
11:35

Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA

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科学领域:

  • 人类遗传学 人类遗传学
  • 分子生物学分子生物学
  • 基因组学就是基因组学.

背景情况:

  • 识别复杂的特征和疾病的因果变异是具有挑战性的.
  • 大多数与疾病相关的变异都存在于非编码区域,对调节功能了解甚少.

研究的目的:

  • 系统地描述特征相关变异的功能.
  • 了解遗传变异如何调节基因调节并影响人类表型.

主要方法:

  • 使用大规模并行报告测试 (MPRA) 来测试5种细胞类型中的221,412个精细映射的变体.
  • 采用和突变发生法来研究变异机制并确定受影响的转录因子.
  • 分析了同一个单元型的调节性表观和变异.

主要成果:

  • 确定了13,121种高精度监管变种.
  • 发现只有69%的变异可以通过已知的转录因子结合基因来解释.
  • 通过和突变生成研究的91%的变体确定了受影响的转录因子.
  • 在11%的测试变体中检测到调节性表皮病.

结论:

  • 提供了常见变异的全面功能目录,这些变异是人类复杂特征的基础.
  • 提供了对调控基因表达和疾病风险的调控语法的新见解.
  • 强调非编码变体和人类遗传学中复杂的监管相互作用的重要性.