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相关概念视频

RNA Structure01:19

RNA Structure

7.9K
The basic structure of RNA consists of a string of ribonucleotides attached by phosphodiester bonds. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
7.9K
RNA Structure01:23

RNA Structure

79.5K
Overview
The basic structure of RNA consists of a five-carbon sugar and one of four nitrogenous bases. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA): messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three RNA types consist of a...
79.5K
Nucleic Acid Structure01:25

Nucleic Acid Structure

9.7K
The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms  a 5′ to 3′ phosphodiester linkage.
DNA Structure
DNA...
9.7K
RNA Stability01:53

RNA Stability

35.9K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
35.9K
RNA Splicing01:32

RNA Splicing

61.0K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
61.0K
RNA-seq03:21

RNA-seq

12.2K
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases. 
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
12.2K

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相关实验视频

Updated: Feb 28, 2026

RNA Secondary Structure Prediction Using High-throughput SHAPE
13:42

RNA Secondary Structure Prediction Using High-throughput SHAPE

Published on: May 31, 2013

32.3K

CooSRNA:使用二级结构对RNA结合进行可通用同轴堆叠预测.

Shasha Li1, Qianqian Xu1, Ya-Lan Tan2

  • 1Center for Applied Mathematics and Interdisciplinary Sciences, School of Mathematics & Statistics, Wuhan Textile University, Wuhan 430200, China.

Biomolecules
|February 27, 2026
PubMed
概括
此摘要是机器生成的。

CoCoSRNA使用一种新的框架准确地预测RNA同轴堆叠配置. 这种计算工具通过分析RNA序列和二次结构来增强RNA3D结构建模,改善复杂结合的预测.

关键词:
RNA 3D 结构结构结 RNA 结 RNA 结 RNA 结同轴堆叠的同轴堆叠方式机器学习是机器学习.

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An Assay for Quantifying Protein-RNA Binding in Bacteria
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An Assay for Quantifying Protein-RNA Binding in Bacteria

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Mapping RNA-RNA Interactions Globally Using Biotinylated Psoralen

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相关实验视频

Last Updated: Feb 28, 2026

RNA Secondary Structure Prediction Using High-throughput SHAPE
13:42

RNA Secondary Structure Prediction Using High-throughput SHAPE

Published on: May 31, 2013

32.3K
An Assay for Quantifying Protein-RNA Binding in Bacteria
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An Assay for Quantifying Protein-RNA Binding in Bacteria

Published on: June 12, 2019

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Mapping RNA-RNA Interactions Globally Using Biotinylated Psoralen
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Mapping RNA-RNA Interactions Globally Using Biotinylated Psoralen

Published on: May 24, 2017

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科学领域:

  • 计算生物学 计算生物学
  • 结构生物学 结构生物学
  • 生物信息学是一种生物信息学.

背景情况:

  • RNA干的同轴堆叠对于RNA的三级结构和空间组织至关重要.
  • 准确预测同轴堆叠对于RNA3D结构建模至关重要.
  • 现有的计算工具难以处理复杂的RNA结.

研究的目的:

  • 开发一个可通用的计算框架,CoCoSRNA,用于预测RNA同轴堆叠配置.
  • 克服现有方法在处理可变或复杂RNA结的局限性.

主要方法:

  • CoCoSRNA将多途径RNA连接分解为伪双向连接.
  • 一个统一的随机森林分类器预测了这些对的堆叠概率.
  • 全球配置是通过整合双向预测来推断的,避免了连接类型的分类.

主要成果:

  • CoCoSRNA在两到七个分支的十字路口上表现出高准确度 (平均值~0.89).
  • 该框架在独立测试集 (CASP15/16,RNA-Puzzles) 上优于现有的交叉点特定方法.
  • 实现一致的准确性,无论结合的复杂性或拓.

结论:

  • CoCoSRNA提供了一个强大的和可通用的方法来预测RNA同轴堆叠.
  • 该框架有效地捕捉了RNA中高阶结构特征.
  • CoCoSRNA具有将其整合到RNA三级结构预测管道中的巨大潜力.