通过酸化激活MEK1的激活机制
Everett Jin1, Levent Sari2, Milo M Lin3
1Lyda Hill Dept. of Bioinformatics, University of Texas Southwestern Medical Ctr., Dallas, TX, USA; St. Mark's School of Texas, Dallas, TX, USA.
Biophysical journal
|February 27, 2026
概括
双化MEK1 (MAP激酶激酶1) 逐渐解开其结构,暴露催化残留物并增强它们的相关运动以实现完全的酶激活.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 结构生物学 结构生物学
背景情况:
- 酸化是一种关键的翻译后修饰,调节蛋白质功能.
- MEK1的激活需要在S218和S222进行酸化,但该机制尚不清楚.
- 缺乏化MEK1的实验结构.
研究的目的:
- 研究MEK1酸化的结构和动态效应.
- 通过酸化阐明MEK1激活的分子机制.
- 了解MEK1酸化的合作性.
主要方法:
- 使用分子动力学模拟来建模MEK1.1.
- 模拟分析了单双酸化状态.
- 计算了符合性和相互信息.
主要成果:
- 酸化逐渐使螺旋在酸化部位附近解开.
- 酸盐组旋转以与催化场进行相互作用.
- 双化暴露了所有四种催化残留物,并诱导了相关的运动.
结论:
- 酸化诱导的部分展开增加了催化残留溶剂的暴露.
- 活跃部位内的动态合对于MEK1活动至关重要.
- 模拟预测R-脊柱对齐在双化MEK1,与酶生物学一致.
相关概念视频
MAPK Signaling Cascades
8.8K
Mitogen-activated protein kinase, or MAPK pathway, activates three sequential kinases to regulate cellular responses such as proliferation, differentiation, survival, and apoptosis. The canonical MAPK pathway starts with a mitogen or growth factor binding to an RTK. The activated RTKs stimulate Ras, which recruits Raf or MAP3 Kinase (MAPKKK), the first kinase of the MAPK signaling cascade. Raf further phosphorylates and activates MEK or MAP2 Kinases (MAPKK), which in turn phosphorylates MAP...
8.8K
PI3K/mTOR/AKT Signaling Pathway
5.9K
The mammalian target of rapamycin (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1 (mTORC1) and mTOR complex 2 (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast, mTORC2 consists of a...
5.9K
Amplifying Signals via Enzymatic Cascade
18.7K
When a ligand binds to a cell-surface receptor, the receptor's intracellular domain changes shape, which may either activate its enzyme function or allow its binding to other molecules. The initial signal is amplified by most signal transduction pathways. This means that a single ligand molecule can activate multiple molecules of a downstream target. Proteins that relay a signal are most commonly phosphorylated at one or more sites, activating or inactivating the protein. Kinases catalyze...
18.7K
The JAK-STAT Signaling Pathway
13.4K
Several cytokine receptors have tightly bound Janus kinase or JAK proteins attached at their cytosolic tail. Small signaling molecules such as cytokines, growth hormones, or prolactins bind to the cytokine receptors and initiate their dimerization. The dimerization brings the cytosolic JAKs together that trans-phosphorylate and activates each other. The activated JAKs now phosphorylate cytosolic tails of the cytokine receptors, which serve as binding sites for adaptor proteins such as SH2...
13.4K
Receptor Tyrosine Kinases
19.9K
Receptor tyrosine kinases or RTKs are membrane-bound receptors that phosphorylate specific tyrosine on protein substrates. RTKs regulate cellular growth, differentiation, survival, and migration. They contain an extracellular ligand binding domain, a transmembrane domain, and a cytosolic tail with intrinsic kinase activity. Several extracellular signaling molecules activate RTKs in one or more ways and relay the signal downstream. Ligands such as platelet-derived growth factor (PDGF) or...
19.9K
Protein Kinases and Phosphatases
15.3K
Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
15.3K


