RNase P和核糖体的共同进化
Anton S Petrov1,2, Claudia Alvarez-Carreño1,3, Loren Dean Williams1,2
1National Aeronautics and Space Administration, Center for the Origins of Life, Georgia Institute of Technology, Atlanta, GA 30032.
概括
该研究重建了RNase P (核糖核蛋白粒子) RNA的进化史,揭示了它与核糖体共同进化. 这两种古老的分子机器都可能在最后一个普遍的共同祖先之前从融合的RNA元素中出现.
科学领域:
- 分子生物学分子生物学
- 进化生物学 进化生物学
- 结构生物学 结构生物学
背景情况:
- 核糖体和RNase P是高度保守的核糖蛋白复合体,对生物过程至关重要.
- 这些复合体在最后一个通用共同祖先 (LUCA) 的时候在结构和功能上已经成熟.
- 之前的工作重建了利用基于3D结构的积累模型的核糖体进化.
研究的目的:
- 扩展积累模型框架,重建RNase P RNA (RPR) 的进化历史.
- 描述LUCA的RPR结构,并确定其出现时间表.
- 研究RPR和核糖体RNA (rRNA) 与tRNA相互作用相关的共同进化.
主要方法:
- 对RPR序列和结构的族遗传采样.
- 根据插入指纹将RPR分成碎片,以追踪进化的增殖.
- 利用tRNA相互作用数据将RPR和rRNA的进化轨迹联系起来.
- 应用基于结构遗传学的积累模型.
主要成果:
- 类似于核糖体的RNase P通过模块化RNA元素的积累进化.
- 描述了LUCA的RPR结构,并重建了其出现时间表.
- 有证据表明,RPR和rRNA在一些积累的元素中具有共同的祖先.
- RPR和rRNA的祖先催化部位可能是通过干-肘-干元素的融合形成的.
- 积模型的成功应用需要纠正传统的RPR次要结构,包括伪结.
结论:
- RNase P和核糖体可能共同演变为一个集成的功能系统.
- 积累模型为理解古代核蛋白复合体的演变提供了一个框架.
- 在RPR和rRNA中保存的结构记录反映了它们的进化增殖.
- 这些发现支持一个基本的生物机械通过模块化组装进化模型.
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