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相关概念视频

Cohesins02:20

Cohesins

5.8K
Cohesin protein complexes are a molecular glue that holds two sister chromatids together. They play an important role both in mitosis and meiosis. In mitosis, all cohesin complexes present on the chromosomes are removed before the start of the anaphase stage.
Cohesin complexes in Meiotic Division
Meiosis involves two distinct rounds of chromosomal segregation and cell divisions— Meiosis I followed by Meiosis II – producing four daughter cells. Meiosis I includes the separation of...
5.8K
Cohesins02:20

Cohesins

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2.4K
Spreading of Chromatin Modifications02:25

Spreading of Chromatin Modifications

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The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
9.9K
Nucleosome Remodeling02:54

Nucleosome Remodeling

11.5K
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
11.5K
Chromatin Packaging02:21

Chromatin Packaging

22.8K
Each human somatic cell contains 6 billion base-pairs of DNA. Each base-pair is 0.34 nm long, which means that each diploid cell contains a staggering 2 meters of DNA. How is such a long DNA strand packed inside a nucleus measuring only 10 - 20 microns in diameter? 
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order...
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Chromatin Packaging02:21

Chromatin Packaging

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相关实验视频

Updated: Mar 14, 2026

In-Nucleus Hi-C in Drosophila Cells
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一个第一原则的定量框架,说明凝聚性调节器如何塑造染色质环挤出.

Zibin Huang1, Xinyi Liu1, Junjun Ding1

  • 1Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Department of Histology and Embryology, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, Guangdong, China.

Cell genomics
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概括

研究人员开发了一种新的循环挤出模型,这是基因组组织中的一个关键过程. 这种"爆发式挤出"框架解释了凝聚素相关因素如何定量调节DNA循环和3D基因组架构.

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科学领域:

  • 基因组学就是基因组学.
  • 分子生物学分子生物学
  • 生物物理学的生物物理.

背景情况:

  • 循环挤出是组织3D基因组的一个基本机制.
  • 与凝聚力相关的因素在调节这一过程中起着至关重要的作用.
  • 需要定量模型来理解基因组架构的复杂动态.

研究的目的:

  • 为量化建模循环挤出开发一个第一原则框架.
  • 为了研究多个凝聚素相关因素在调节循环挤出中的作用.
  • 预测调节因素对运动动力学和染色体组织的影响.

主要方法:

  • 一个第一原则生物物理模型的开发.
  • 循环挤出动态的定量分析.
  • 模拟染色质接触模式和染色体形态.

主要成果:

  • 介绍了"爆破式挤出"模型.
  • 通过多个与凝聚素相关的因素来证明定量调节.
  • 在不同尺度上预测运动动力学和3D基因组结构的调节器依赖的变化.

结论:

  • "爆发式挤出"框架为3D基因组架构的定量建模提供了一种机械基础.
  • 该模型预测了凝聚素相关因素如何影响基因组组织.
  • 这项工作推动了我们对控制基因组折叠的生物物理原理的理解.