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Updated: Jul 20, 2026

Establishment and Optimization of a High Throughput Setup to Study Staphylococcus epidermidis and Mycobacterium marinum Infection as a Model for Drug Discovery
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Establishment and Optimization of a High Throughput Setup to Study Staphylococcus epidermidis and Mycobacterium marinum Infection as a Model for Drug Discovery

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gLeiden:在GPU上使用定向和非定向图形的加速社区检测算法

Beenish Gul1, Maria Murach2, Stefan Bekarinov3,4,5

  • 1Department of Computer Science, University of Virginia, Charlottesville, Virginia, 22903, United States.

Bioinformatics advances
|March 16, 2026
PubMed
概括

我们开发了gLeiden,这是一个GPU加速的Leiden算法实现,支持定向图形,并显著加快了大型单细胞数据集中的社区检测. 该工具为分析scRNA-seq和质细胞计数据提供了高性能替代方案.

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相关概念视频

Cluster Sampling Method01:20

Cluster Sampling Method

Appropriate sampling methods ensure that samples are drawn without bias and accurately represent the population. Because measuring the entire population in a study is not practical, researchers use samples to represent the population of interest.
To choose a cluster sample, divide the population into clusters (groups) and then randomly select some of the clusters. All the members from these clusters are in the cluster sample. For example, if you randomly sample four departments from your...
Vector Algebra: Graphical Method01:10

Vector Algebra: Graphical Method

Vectors can be multiplied by scalars, added to other vectors, or subtracted from other vectors. The vector sum of two (or more) vectors is called the resultant vector or, for short, the resultant.
We use the laws of geometry to construct resultant vectors, followed by trigonometry to find vector magnitudes and directions. For a geometric construction of the sum of two vectors in a plane, we follow the parallelogram rule. Suppose two vectors are at arbitrary positions. Translate either one of...
Acceleration Vectors01:30

Acceleration Vectors

In everyday conversation, accelerating means speeding up. Acceleration is a vector in the same direction as the change in velocity, Δv, therefore the greater the acceleration, the greater the change in velocity over a given time. Since velocity is a vector, it can change in magnitude, direction, or both. Thus acceleration is a change in speed or direction, or both. For example, if a runner traveling at 10 km/h due east slows to a stop, reverses direction, and continues their run at 10 km/h due...
Sequence Networks of Rotating Machines01:24

Sequence Networks of Rotating Machines

A Y-connected synchronous generator, grounded through a neutral impedance, is designed to produce balanced internal phase voltages with only positive-sequence components. The generator's sequence networks include a source voltage that is exclusively in the positive-sequence network. The sequence components of line-to-ground voltages at the generator terminals illustrate this configuration.
Zero-sequence current induces a voltage drop across the generator's neutral impedance and other...
Parallel Processing01:20

Parallel Processing

The brain processes sensory information rapidly due to parallel processing, which involves sending data across multiple neural pathways at the same time. This method allows the brain to manage various sensory qualities, such as shapes, colors, movements, and locations, all concurrently. For instance, when observing a forest landscape, the brain simultaneously processes the movement of leaves, the shapes of trees, the depth between them, and the various shades of green. This enables a quick and...
Graphs of Polar Equations01:17

Graphs of Polar Equations

The polar coordinate system represents points using a distance from a central point (the pole) and an angle from a reference direction (the polar axis). Unlike rectangular coordinates, polar coordinates are ideal for graphing curves with radial symmetry or periodic behavior.Some general forms of graphs in polar coordinates include the following:Equation of a Circle (Centered at the Pole):A graph where the radius remains constant for all angles traces a circle centered at the pole:Equation of a...