概括
硫醇标签显示了转录和非转录的Physarum rDNA之间的染色质结构差异. 基因组H3的反应性是对转录区域的特异性,表明基因表达中具有不同的结构性作用.
科学领域:
- 分子生物学分子生物学
- 染色体结构 染色体结构
- 生物化学 生物化学
背景情况:
- 染色质子单元,特别是基因组修饰,在调节基因转录中起着至关重要的作用.
- 了解转录和非转录DNA区域之间的结构差异是解读基因调节机制的关键.
研究的目的:
- 为了研究在转录与非转录PhysarumrDNA的区域中染色体子单元的结构差异.
- 为了识别与活跃转录相关的特定的质子修饰或可访问性变化.
主要方法:
- 使用硫烯试剂乙胺化素 (IAF) 进行标签.
- 采用了对rDNA染色质的限制酶裂变.
- 进行了电子显微镜,以可视化色素子单元结构.
主要成果:
- 从转录的rDNA区域中,IAF选择性地标记 histone H3 sulfhydryl 组为延长的单体子单元 (A 颗粒).
- 在非转录的rDNA间隔区域的11S单体中,海斯H3硫基组没有反应.
- 在无活性rDNA染色体 (球状阶段) 中,H3反应性不存在.
- 电子显微镜揭示了由两个由核蛋白桥连接的球体组成的扩展子单位.
结论:
- 染色质结构在转录和非转录的Physarum rDNA之间有显著差异.
- 基因组H3硫基组可访问性是转录的rDNA区域的标志物.
- 这些结构变异可能有助于rDNA的基因调节差异.
相关概念视频
Nucleosome Remodeling
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Spreading of Chromatin Modifications
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Writers
The writer is an enzyme that can...
Duplication of Chromatin Structure
The process of chromosome duplication during cell division requires genome-wide disruption and re-assembly of chromatin. The chromatin structure must be accurately inherited, reassembled, and maintained in the daughter cells to ensure lineage propagation.
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
Heterochromatin
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...


