概括
球状蛋白经常表现出重复的结构模式. 铜超氧化物脱酶具有两个配对的子域,突出显示了这种反复折叠图案在蛋白质结构中的重要性.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 蛋白质科学 蛋白质科学
背景情况:
- 球状蛋白质可以具有内部重复的结构动机.
- 许多酶表现出伪对称的,双叶架构与大约2倍对称.
- 这种模式也可以在单个蛋白质域内发生,形成两个相互锁定的,拓上相似的子域.
研究的目的:
- 调查蛋白质领域中重复折叠模式的存在和意义.
- 分析铜超氧化物脱酶的结构组织.
- 讨论协同基因重复在形成配对蛋白质结构中的进化含义.
主要方法:
- 球状蛋白质的结构分析.
- 识别伪对称的架构和重复的图案.
- 叠加等价的α-碳原子以量化结构相似性 (1-2 A的RMSD).
主要成果:
- 发现铜-超氧化物脱酶含有两个配对的子域.
- 这些子域具有显著的结构相似性,表明它们具有共同的进化起源.
- 配对的子域以对称的方式相互锁定,形成一个紧的球体,对域完整性至关重要.
结论:
- 重复的折叠模式是蛋白质结构的一个重要特征,铜超氧化物脱酶就是一个例子.
- 配对结构很可能是从二维前体通过协同基因重复进化而来的.
- 子域的相互依赖性表明它们作为一个单元而不是独立的折叠实体而起作用.
相关概念视频
Protein Folding
Overview
Protein and Protein Structure
Proteins are one of the most abundant organic molecules in living systems and have the most diverse range of functions of all macromolecules. Proteins may be structural, regulatory, contractile, or protective. They may serve in transport, storage, or membranes; or they may be toxins or enzymes. Their structures, like their functions, vary greatly. They are all, however, amino acid polymers arranged in a linear sequence.
A protein's shape is critical to its function. For example, an enzyme can...
A protein's shape is critical to its function. For example, an enzyme can...
Amyloid Fibrils
Amyloid fibrils are aggregates of misfolded proteins. Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils.
Amyloid deposits were observed as early as 1639 in the liver and the spleen. In 1854, Rudolph Virchow performed iodine staining, normally used to...
Amyloid deposits were observed as early as 1639 in the liver and the spleen. In 1854, Rudolph Virchow performed iodine staining, normally used to...
Molecular Chaperones and Protein Folding
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
Protein Modifications in the RER
Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal sequences.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal sequences.
Protein Folding
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...


