相关实验视频
Updated: Aug 16, 2026

07:27
Direct Restart of a Replication Fork Stalled by a Head-On RNA Polymerase
Published on: April 29, 2010
转录过程性:蛋白质-DNA相互作用将延长复合体保持在一起
E Nudler1, E Avetissova, V Markovtsov
1Public Health Research Institute, New York, NY 10016, USA.
概括
大肠杆菌RNA聚合酶 (RNAP) 可以在转录延长过程中切换DNA模板. 这一过程涉及不同的RNAP-DNA相互作用,包括由指介导的前端相互作用,确保持续的RNA合成.
科学领域:
- 分子生物学分子生物学
- 生物化学 生物化学
- 遗传学 是一个遗传学.
背景情况:
- 转录延长涉及RNA聚合酶 (RNAP),DNA和新生RNA的三元复合体.
- 了解RNAP-DNA相互作用对于破译转录忠实性和调节至关重要.
研究的目的:
- 通过延长RNAP来研究DNA模板切换的机制.
- 为了剖析稳定延长复合体的RNAP-DNA相互作用.
主要方法:
- 用短的DNA片段作为切换模板来研究RNAP-DNA相互作用.
- 采用蛋白质-DNA交叉链接来绘制相互作用地点的地图.
- 通过突变分析研究了特定RNAP子单元和动机的作用.
主要成果:
- 证明延长RNAP可以通过端到端转换来切换DNA模板,而不会造成转录损失.
- 确定了两个不同的RNAP-DNA相互作用:非离子前 (F) 相互作用 (7-9 bp) 和离子后 (R) 相互作用.
- 将F相互作用映射到β'子单元的指,并将R相互作用映射到β子单元的催化域.
- 表明指的干扰会损害F相互作用,导致盐敏感复合体的过程性降低.
结论:
- 提出一个模型,其中三边接触稳定了核心复合体,而指介导的前端相互作用确保了进程性.
- 强调特定RNAP-DNA接触对于在模板切换期间保持转录保真的重要性.
相关概念视频
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
Bacterial Transcription
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription Initiation
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The Replisome
DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...

