剖析一个真核生物基因组的调节电路
F C Holstege1, E G Jennings, J J Wyrick
1Whitehead Institute for Biomedical Research, Cambridge, Massachusetts 02142, USA.
Cell
|December 9, 1998
概括
研究人员确定了调节不同基因组的酵母转录机械的关键组件. 这揭示了超越转录因子的新型营养响应基因调节机制.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生物化学
背景情况:
- 基因表达受到转录因子的严格调节.
- 转录启动机制在基因调节中起着至关重要的作用.
- 了解启动因子和基因表达之间的相互作用至关重要.
研究的目的:
- 在酵母中识别由核心转录启动机器调节的基因.
- 研究RNA聚合酶II全酶,TFIID和SAGA复合物的基因表达中的作用.
- 发现酵母基因表达中的新型调节机制.
主要方法:
- 在酵母中进行全基因组表达分析.
- 对转录启动组件的功能分析.
- 对基因表达模式的比较分析.
主要成果:
- 不同的基因组由RNA聚合酶II全酶,TFIID和SAGA复合体进行调节.
- 确定了一种新的基因调节层,独立于基因特异性转录因子.
- 有证据表明,这些启动组件在营养限制期间协调基因表达.
结论:
- 转录启动装置是信号转导通路的直接目标.
- 酵母利用复杂的机制来协调基因调节.
- 这些发现为基因表达控制的复杂性提供了新的见解.
相关概念视频
Gene Conversion
Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...
Combinatorial Gene Control
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
Epistasis Analysis
Although Mendel chose seven unrelated traits in peas to study gene segregation, most traits involve multiple gene interactions that create a spectrum of phenotypes. When the interaction of various genes or alleles at different locations influences a phenotype, this is called epistasis. Epistasis often involves one gene masking or interfering with the expression of another (antagonistic epistasis). Epistasis often occurs when different genes are part of the same biochemical pathway. The...
Structure of a Gene
A gene is the fundamental unit of heredity. Every individual has two copies of each gene, one inherited from each parent. Although most people contain the same genes, there is a small fraction that is slightly different amongst people. A gene with a small difference in its sequence of DNA bases forms different alleles, contributing to different phenotypes.
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
Gene Conversion
Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...
Regulation of Expression at Multiple Steps
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...


