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Published on: January 17, 2012
Structure and expression of the mouse growth hormone receptor/growth hormone binding protein gene
J G Moffat1, A Edens, F Talamantes
1Department of Biology, University of California, Santa Cruz, California 95060, USA.
Abstract:
The mouse growth hormone receptor/growth hormone-binding protein (GHR/BP) gene produces several distinct mRNA forms through alternative splicing, including mRNAs encoding the membrane-bound growth hormone receptor (GHR) and the soluble growth hormone-binding protein (GHBP). Transcripts are also heterogeneous in their 5' regions due to alternative selection of two major 5' untranslated region (5'UTR) sequences, designated L1 and L2. Here we report the cloning of all mouse GHR/BP coding exons as well as the exon encoding 5'UTR L2, the most widely expressed 5'UTR. The mouse GHR/GHBP gene contains 11 coding exons, 9 of which are homologous in size and sequence to human GHR exons 2-10. The two mouse exons that do not have homologs in the human gene are designated exons 4B and 8A. Exon 4B, located between exons 4 and 5, encodes an 8-amino acid segment of the ligand binding domain that is unique to mouse GHR and GHBP. Analysis by reverse transcriptase-polymerase chain reaction indicated that exon 4B is constitutively present in mouse GHR and GHBP mRNA. Exon 8A encodes the GHBP hydrophilic tail and 3'UTR sequence. 5'UTR L2 is encoded by a single exon located at least 27 kb upstream of exon 2 and at least 12 kb upstream of the exon encoding 5'UTR L1. The transcription start sites of UTR L2 were mapped and the 5' flanking region sequenced. The exon and proximal promoter region are GC rich, and share a high level of conservation with the equivalent exons in the sheep, bovine and human GHR genes. A CCAAT motif and several putative Sp1 motifs are present, and there is no TATA box. Homology between the mouse sequence and other species is limited to a region of 450 bp upstream of the exon due to the insertion of a fragment of a LINE-1 element upstream of the mouse L2 exon. Ribonuclease protection assays were used to confirm that 5'UTR L2 is widely expressed in multiple tissues and is the predominant form of transcript except in the liver during pregnancy, in which 5'UTR L1 is the major form.
Insights
This study details the mouse growth hormone receptor/binding protein (GHR/BP) gene structure, identifying unique exons and regulatory regions. It clarifies alternative splicing and 5' untranslated region (5'UTR) usage, crucial for GHR/BP gene expression. Keywords: mouse GHR/BP gene, alternative splicing, 5'UTR.
Area of Science:
- Molecular Biology
- Genetics
- Gene Expression
Background:
- The mouse growth hormone receptor/growth hormone-binding protein (GHR/BP) gene exhibits complex alternative splicing, producing distinct mRNA variants.
- Transcriptional heterogeneity arises from alternative selection of two major 5' untranslated region (5'UTR) sequences, L1 and L2.
Purpose of the Study:
- To clone and characterize all mouse GHR/BP coding exons and the exon encoding the widely expressed 5'UTR L2.
- To investigate the genomic structure and regulatory elements of the mouse GHR/BP gene, including unique exons and promoter regions.
Main Methods:
- Cloning of mouse GHR/BP coding exons and the 5'UTR L2 exon.
- Reverse transcriptase-polymerase chain reaction (RT-PCR) to analyze exon 4B presence.
- Sequence analysis of the 5' flanking region of the 5'UTR L2 exon.
- Ribonuclease protection assays to determine tissue-specific expression of 5'UTR variants.
Main Results:
- Identified 11 coding exons in the mouse GHR/BP gene, with novel exons 4B and 8A.
- Exon 4B is constitutively present in mouse GHR and GHBP mRNA, encoding a unique ligand-binding domain segment.
- Exon 8A encodes the GHBP hydrophilic tail and 3'UTR.
- The 5'UTR L2 exon and its GC-rich promoter show conservation with other species, despite a LINE-1 insertion upstream.
- 5'UTR L2 is widely expressed, with 5'UTR L1 predominant in pregnant liver.
Conclusions:
- The mouse GHR/BP gene possesses unique structural features, including novel exons, contributing to transcript diversity.
- The characterized promoter elements and conserved regions suggest regulatory mechanisms for GHR/BP gene expression.
- Understanding these structural and regulatory aspects is vital for deciphering GHR/BP function in growth and metabolism.
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