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A multiplasmid approach to preparing large libraries of polyketides
Q Xue1, G Ashley, C R Hutchinson
1Kosan Biosciences, 3832 Bay Center Place, Hayward, CA 94545, USA.
Summary
A new three-plasmid system enables combinatorial biosynthesis of polyketides by expressing 6-deoxyerythronolide B synthase (DEBS). This method efficiently produces novel polyketide analogs for drug discovery.
Area of Science:
- Biotechnology
- Synthetic Biology
- Natural Product Chemistry
Background:
- Type I modular polyketide synthases (PKSs) are crucial for producing complex polyketide natural products.
- Heterologous expression of large PKS gene clusters can be challenging.
- Combinatorial biosynthesis offers a powerful approach to generate novel polyketide analogs.
Purpose of the Study:
- To develop a versatile three-plasmid system for the heterologous expression of 6-deoxyerythronolide B synthase (DEBS).
- To facilitate combinatorial biosynthesis of polyketides using modular PKS.
- To demonstrate the system's utility in generating a library of novel polyketide analogs.
Main Methods:
- Individual cloning of eryA PKS genes encoding DEBS subunits into compatible Streptomyces vectors.
- Transformation of Streptomyces lividans with the three-plasmid system.
- Generation of modified plasmids with defined mutations for combinatorial library production.
Main Results:
- Successful heterologous expression of DEBS using the three-plasmid system in Streptomyces lividans.
- Production of 6-deoxyerythronolide B at levels comparable to single-plasmid expression systems.
- Generation of a diverse library of 6-deoxyerythronolide B analogs through combinatorial assembly of mutated plasmids.
Conclusions:
- The developed three-plasmid system is effective for heterologous expression of DEBS and combinatorial biosynthesis of polyketides.
- This approach can be extended to other modular PKS, enabling the production of numerous novel natural products.
- The system holds significant potential for discovering new drug candidates through natural product analog generation.