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Updated: Oct 18, 2026

Multicolor Flow Cytometry-based Quantification of Mitochondria and Lysosomes in T Cells
Published on: January 9, 2019
Comment on analyzing flow cytometric data for comparison of mean values of the coefficient of variation of the G1
1International EcoGen, Inc., North Vancouver, BC, Canada.
Background:
The coefficient of variation (CV) is often used to characterize and summarize the flow cytometry analysis of nuclear DNA of the Go/G1 peak in a cell population within an individual organism. CV values are frequently used in subsequent statistical analysis to compare experimental groups of individuals.
Methods:
We explain why the conventional analysis of variance, linear comparisons and regressions that employ the F and t-tests are not appropriate for analyzing CV data sets. The weighted least squares procedure which utilizes the chi-square test is presented as an adequate method. We further explain why this type of data needs to be analyzed by this procedure.
Results:
To illustrate the application of the weighted least squares procedure, we analyzed a real data set that had been previously analyzed by conventional methods. We found that a non-significant result (p = 1) using the latter was significant when re-analyzed with the weighted least squares procedure (p = 0.032).
Conclusions:
Significant differences between treatments established by the weighted least squares often go unidentified by the conventional analysis. Use of the weighted least squares procedure is recommended for analyzing CV data sets.
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