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ExInt: an Exon/Intron database.

M Sakharkar1, M Long, T W Tan

  • 1Bioinformatics Center, National University of Singapore, Singapore.

Nucleic Acids Research
|December 11, 1999
PubMed
Summary
This summary is machine-generated.

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The Exon/Intron (ExInt) database provides comprehensive data on eukaryotic gene structures, including intron sequences and phases. This resource aids researchers in exploring gene organization and evolution.

Area of Science:

  • Genomics
  • Molecular Biology
  • Bioinformatics

Background:

  • Understanding eukaryotic gene structure is crucial for deciphering gene function and evolution.
  • The Exon/Intron (ExInt) database consolidates information on exon-intron organization.

Purpose of the Study:

  • To present the Exon/Intron (ExInt) database, a resource for eukaryotic gene structure information.
  • To detail the features and accessibility of the ExInt database.

Main Methods:

  • Compilation of exon and intron sequences for eukaryotic genes.
  • Inclusion of intron nucleotide and amino acid sequences, phase, and position.
  • Generation of specialized sub-databases (predicted, experimental, organelle, nuclear introns).

Main Results:

Related Experiment Videos

  • The ExInt database contains detailed information on intron features.
  • Four specialized sub-databases enhance data specificity.
  • A retrieval system with GenBank pointers facilitates data access.

Conclusions:

  • The ExInt database offers a valuable, searchable resource for eukaryotic gene structure analysis.
  • Its comprehensive data and accessibility support diverse research applications in genomics and molecular biology.