Susceptibility to multiple sclerosis mediated by HLA-DRB1 is influenced by a second gene telomeric of the TNF cluster
R J Allcock1, E G de la Concha, M Fernandez-Arquero
1Department of Biochemistry, University of Western Australia, Nedlands. rallock@dci.uwa.edu.au
Abstract:
Susceptibility to multiple sclerosis (MS) is clearly associated with human leukocyte antigen (HLA)-DRB1*1501, but some studies show associations with HLA-B7 and -B18. These are often co-expressed with DRB1*1501 in the ancestral haplotypes (AH) denoted 7.1 (HLA-A3, B7, tumor necrosis factor [TNF]a11b4, DRB1*1501) and 18.1 (HLA-A25, B18, TNFa10b4, DRB 1*1501). Here we present a systematic study of 218 patients and 274 controls typed at all standard class II and TNF microsatellite loci, and a novel non-synonymous polymorphism in the central major histocompatibility complex gene, inhibitor of kappa B-like protein (IKBL). The C allele at IKBL+738 is only found on the 7.1 haplotype. HLA-DRB1*1501 was associated with disease, as expected. When subjects expressing DRB 1*501 were analyzed separately, TNFa11b4 and IKBL+738C were less common in the patients and, hence, mark an allele that mediates resistance which lies telomeric of IKBL. TNFa10b4 and TNFa1b5 were more common in DRB1*1501 patients than in controls. These alleles have been associated with the 18.1 and 18.2 AH, respectively. Since no component of these haplotypes was an independent risk factor in this study, it appears likely that a gene linked to TNFa10b4 and TNFa1b5 modifies the effect of the susceptibility locus marked by HLA-DRB1*1501. Potential candidate genes telomeric of the TNF cluster are discussed.
Insights
Human leukocyte antigen (HLA)-DRB1*1501 is linked to multiple sclerosis (MS) susceptibility. Other genes, like those near the tumor necrosis factor (TNF) cluster, may modify this risk, suggesting potential resistance alleles.
Area of Science:
- Immunogenetics
- Human Leukocyte Antigen (HLA) complex
- Multiple Sclerosis (MS) genetics
Background:
- Multiple Sclerosis (MS) susceptibility is strongly associated with the Human Leukocyte Antigen (HLA)-DRB1*1501 allele.
- Previous studies suggest potential associations with HLA-B7 and HLA-B18, often found on specific ancestral haplotypes (AH) co-expressed with HLA-DRB1*1501.
- The genetic architecture of MS risk, particularly within the Major Histocompatibility Complex (MHC) region, requires further elucidation.
Purpose of the Study:
- To systematically investigate the association of specific HLA and tumor necrosis factor (TNF) alleles and a novel polymorphism in the inhibitor of kappa B-like protein (IKBL) gene with MS susceptibility.
- To identify genetic factors that may modify the risk conferred by HLA-DRB1*1501.
- To explore potential resistance alleles located telomeric to the IKBL gene.
Main Methods:
- Genotyping of 218 MS patients and 274 controls at standard class II and TNF microsatellite loci.
- Typing for a novel non-synonymous polymorphism (IKBL+738) in the central MHC region.
- Statistical analysis to assess associations between specific alleles, haplotypes, and MS status, including stratified analysis for HLA-DRB1*1501 carriers.
Main Results:
- HLA-DRB1*1501 was confirmed as a significant susceptibility factor for MS.
- The IKBL+738C allele, found exclusively on the 7.1 ancestral haplotype, and the TNFa11b4 allele were less frequent in MS patients, suggesting a protective effect.
- Alleles TNFa10b4 and TNFa1b5, associated with the 18.1 and 18.2 ancestral haplotypes, were more common in HLA-DRB1*1501 positive MS patients, indicating a modifying role in disease risk.
Conclusions:
- While HLA-DRB1*1501 is a primary risk factor for MS, other genes within the MHC region, particularly telomeric to the TNF cluster, significantly modulate this susceptibility.
- The identified resistance alleles (IKBL+738C and TNFa11b4) and potential risk-modifying alleles (TNFa10b4 and TNFa1b5) highlight the complex genetic landscape of MS.
- Further investigation into candidate genes telomeric to the TNF locus is warranted to fully understand their role in MS pathogenesis.
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