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Published on: September 7, 2017
DNA methylation-dependent regulation of pef expression in Salmonella typhimurium
1Department of Pathology, University of Utah Health Sciences Center, Salt Lake City, UT 84132, USA.
Abstract:
Plasmid-encoded fimbriae (Pef) expressed by Salmonella typhimurium mediate adhesion to mouse intestinal epithelium. The pef operon shares features with the Escherichia coli pyelonephritis-associated pilus (pap) operon, which is under methylation-dependent transcriptional regulation. These features include conserved DNA GATC box sites in the upstream regulatory region as well as homologues of the PapI and PapB regulatory proteins. Unlike Pap fimbriae, which are expressed in a variety of laboratory media, Pef fimbriae were expressed only in acidic, rich broth under standing culture conditions. Analysis of S. typhimurium grown under these conditions indicated that Pef production was regulated by a phase variation mechanism, in which the bacterial population was skewed between fimbrial expression (phase ON) and non-expression (phase OFF) states. Leucine-responsive regulatory protein (Lrp) and DNA adenine methylase (Dam) were required for pef transcription. In contrast, the histone-like protein (H-NS) and the stationary-phase sigma factor (RpoS) repressed pef transcription. Methylation of the pef GATC II site appeared to be required for pef fimbrial expression based on analysis of a GCTC II mutant that did not express Pef fimbriae. Analysis of the DNA methylation states of pef GATC sites indicated that, under acidic growth conditions, which induced Pef production, most GATC I sites were non-methylated, whereas GATC II and GATC X were predominantly methylated. The methylation protection at GATC I and GATC II was dependent upon Lrp and was modulated by PefI. Together, these results indicate that Pef production is regulated by DNA methylation, which is the first example of methylation-dependent gene regulation outside of E. coli.
Insights
Salmonella typhimurium
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Plasmid-encoded fimbriae (Pef) in Salmonella typhimurium are crucial for adhesion to the intestinal epithelium.
- The pef operon shares regulatory similarities with the Escherichia coli pyelonephritis-associated pilus (pap) operon, suggesting potential methylation-dependent control.
- Pef fimbriae expression is restricted to specific conditions, unlike other fimbriae, indicating unique regulatory mechanisms.
Purpose of the Study:
- To investigate the regulatory mechanisms governing Pef fimbriae production in Salmonella typhimurium.
- To determine the role of DNA methylation in the transcriptional regulation of the pef operon.
- To identify key regulatory proteins involved in Pef expression.
Main Methods:
- Analysis of S. typhimurium grown under specific acidic, rich broth conditions.
- Investigation of phase variation mechanisms controlling fimbrial expression.
- Assays to determine the requirement of regulatory proteins (Lrp, Dam, H-NS, RpoS) and DNA methylation sites (GATC I, II, X) for pef transcription.
Main Results:
- Pef production is regulated by phase variation, with populations existing in expression (ON) and non-expression (OFF) states.
- Leucine-responsive regulatory protein (Lrp) and DNA adenine methylase (Dam) are essential for pef transcription.
- Histone-like protein (H-NS) and stationary-phase sigma factor (RpoS) repress pef transcription.
- Methylation of the pef GATC II site is crucial for fimbrial expression.
- Under inducing acidic conditions, GATC I sites are non-methylated, while GATC II and X sites are methylated.
- Lrp influences methylation protection at GATC I and GATC II sites, modulated by PefI.
Conclusions:
- Pef fimbriae production in Salmonella typhimurium is regulated by DNA methylation.
- This study presents the first evidence of methylation-dependent gene regulation outside of Escherichia coli.
- The findings elucidate a novel regulatory pathway for bacterial adhesion factors.
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