Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Collective protein dynamics in relation to function.

H J Berendsen1, S Hayward

  • 1Department of Chemistry, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), The University of Groningen, Groningen, 9747 AG, The Netherlands. berendsen@chem.rug.nl

Current Opinion in Structural Biology
|April 8, 2000
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A novel likely pathogenic CLCN5 variant in Dent's disease.

BMC nephrology·2023
Same author

Consultant-delivered care.

Anaesthesia·2015
Same author

Simultaneous integration of mixed quantum-classical systems by density matrix evolution equations using interaction representation and adaptive time step integrator.

Journal of computational chemistry·2014
Same author

Determining the biomass fraction of mixed waste fuels: A comparison of existing industry and (14)C-based methodologies.

Waste management (New York, N.Y.)·2014
Same author

Impact of Schmallenberg virus on British sheep farms during the 2011/2012 lambing season.

The Veterinary record·2014
Same author

Collective variable description of native protein dynamics.

Annual review of physical chemistry·2013
Same journal

Tomogram exploration through template matching and deep learning.

Current opinion in structural biology·2026
Same journal

A comparative review of cryo-electron ptychography: Biological applications and future perspectives.

Current opinion in structural biology·2026
Same journal

Metabolic disruptions through a three-dimensional genomic lens.

Current opinion in structural biology·2026
Same journal

Collective variable design for biomolecular conformational dynamics.

Current opinion in structural biology·2026
Same journal

Polymer scaling in protein crowding: From dilute coils to semidilute meshes.

Current opinion in structural biology·2026
Same journal

Tuning the physicochemical properties of rationally designed protein-based biomolecular condensates.

Current opinion in structural biology·2026
See all related articles

Analyzing protein internal motions helps understand their energy landscape. Relating large collective motions to protein function, like binding and folding, remains a key challenge in biophysics.

Area of Science:

  • Biophysics
  • Computational Biology
  • Structural Biology

Background:

  • Techniques exist to analyze protein internal motions, distinguishing large collective movements from smaller ones.
  • Understanding these motions offers insights into protein energy landscapes.

Purpose of the Study:

  • To explore the relationship between large collective protein motions and functional properties.
  • To investigate how internal motions relate to protein binding, regulation, and folding.

Main Methods:

  • Analysis of protein internal dynamics.
  • Characterization of large collective motions.
  • Correlation of motions with functional attributes.

Main Results:

Related Experiment Videos

  • Methods for separating protein motions are established.
  • Insights into protein energy landscapes are gained.
  • The challenge of linking collective motions to function is being addressed.
  • Conclusions:

    • Characterizing protein internal motions is crucial for understanding protein dynamics.
    • Connecting large-scale motions to protein function, regulation, and folding is an active area of research.