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Melanoma genetics: an update with focus on the CDKN2A(p16)/ARF tumor suppressors
1Division of Dermatology, Department of Medicine and Department of Pathology, University of Washington School of Medicine, Seattle 98195-6524, USA. mpiepkor@u.washington.edu
Unlabelled:
Investigative interest in atypical nevi and familial melanoma has contributed to the identification of several candidate melanoma loci within the human genome. Molecular defects in both tumor suppressor genes and oncogenes have been pathogenically linked to melanoma in recent studies. Of the loci currently characterized, the major gene resides on chromosome 9p and encodes a tumor suppressor designated p16. This gene, which is also known as CDKN2A, is either mutated or deleted in a large majority of melanoma cell lines, as well as in many uncultured melanoma cells and in the germline of melanoma kindreds. A novel aspect of the p16 locus is that it encodes not just one but two separate gene products that are transcribed in alternative reading frames. Both products function as negative regulators of cell cycle progression. The p16 protein itself executes its effects by competitively inhibiting cyclin-dependent kinase 4, which is a factor necessary for cellular progression through a major regulatory transition of the cell division cycle. Inherited and acquired deletions or point mutations in the p16 gene increase the likelihood that potentially mutagenic DNA damage will escape repair before cell division. Notably, the second product of the locus, ARF (for alternative reading frame), regulates cell growth through independent effects on the p53 pathway. Although there is little evidence that ARF by itself is involved in the pathogenesis of melanoma, deletions at the p16 locus disable two separate pathways that control cell growth. These recent advances open up the possibility of genetic testing for melanoma susceptibility in the setting of familial melanoma and suggest novel therapeutic strategies for melanoma based on gene therapy or small molecule mimicry targeted to the correction of defects in the p16 regulatory pathway. (J Am Acad Dermatol 2000;42:705-22.)
Learning Objective:
At the conclusion of this learning activity, participants should be familiar with the historical aspects of melanoma genetics and should have a greater understanding of the CDKN2A(p16)/ARF tumor suppressor genes.
Insights
Genetic defects in the CDKN2A(p16)/ARF tumor suppressor gene locus on chromosome 9p are strongly linked to familial melanoma. Mutations and deletions in this locus disrupt cell cycle regulation, increasing melanoma risk.
Area of Science:
- Genetics
- Molecular Biology
- Dermatology
Background:
- Investigative interest in atypical nevi and familial melanoma has identified several candidate melanoma genetic loci.
- Molecular defects in tumor suppressor genes and oncogenes are pathogenically linked to melanoma.
- The major melanoma susceptibility gene resides on chromosome 9p, encoding the tumor suppressor p16 (CDKN2A).
Purpose of the Study:
- To elucidate the role of the CDKN2A(p16)/ARF tumor suppressor gene locus in melanoma pathogenesis.
- To provide an understanding of the historical aspects of melanoma genetics.
- To highlight the implications for genetic testing and therapeutic strategies.
Main Methods:
- Analysis of melanoma cell lines, uncultured melanoma cells, and germline DNA from melanoma kindreds.
- Characterization of mutations and deletions within the p16 (CDKN2A) gene locus.
- Investigation of the dual gene products, p16 and ARF (alternative reading frame).
Main Results:
- The p16 (CDKN2A) gene is frequently mutated or deleted in melanoma cell lines and familial melanoma.
- The p16 locus encodes two products, p16 and ARF, which regulate cell cycle progression and cell growth via distinct pathways.
- Deletions at the p16 locus disable both the p16/cyclin-dependent kinase 4 and ARF/p53 pathways, impacting cell growth control.
Conclusions:
- The CDKN2A(p16)/ARF locus plays a critical role in melanoma development by regulating cell cycle progression.
- Defects in this locus contribute to increased susceptibility to melanoma, particularly in familial cases.
- Advances in understanding CDKN2A(p16)/ARF offer potential for genetic testing and novel therapeutic interventions for melanoma.