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MouseNet database: digital management of a large-scale mutagenesis project
W Pargent1, S Heffner, K F Schäble
1Institute of Experimental Genetics, GSF Research Center for Environment and Health, 85764 Neuherberg, Germany.
Summary
The Munich ENU Mouse Mutagenesis Screen developed MouseNet(c), a central database for managing large-scale mutant production and phenotyping data. This system enhances data accessibility and workflow management for researchers and the scientific community.
Area of Science:
- Genetics and Genomics
- Bioinformatics
- Animal Models
Background:
- The Munich ENU Mouse Mutagenesis Screen is a large-scale project involving mutant production, phenotyping, and mapping.
- Managing the vast amount of data generated by this project requires a robust central database system.
Purpose of the Study:
- To develop and implement a central database, named MouseNet(c), for the Munich ENU Mouse Mutagenesis Screen.
- To manage and process all data generated by the mutagenesis project, supporting workflow management for core facilities and screening groups.
Main Methods:
- Development of MouseNet(c) on a Sybase platform, running on a UNIX server.
- Implementation of three major software components: Animal Management System (AMS), Sample Tracking System (STS), and Result Documentation System (RDS).
- Integration of workflow functions and plausibility checks within the database system.
Main Results:
- MouseNet(c) provides a centralized system for storing and processing all project data.
- The system offers accessibility from different client platforms via the Internet.
- MouseNet(c) is a full-featured multi-user system with access restriction and data locking mechanisms.
Conclusions:
- MouseNet(c) effectively manages the complex data requirements of the Munich ENU Mouse Mutagenesis Screen.
- The system enhances data sharing and accessibility for participating screening groups and the broader scientific community.
- MouseNet(c) represents a significant advancement in managing large-scale mutagenesis project data.